DRSC/TRiP Functional Genomics Resources

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Protein Alignment Menl-1 and me3

DIOPT Version :9

Sequence 1:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001082825.1 Gene:me3 / 492719 ZFINID:ZDB-GENE-041111-294 Length:603 Species:Danio rerio


Alignment Length:538 Identity:244/538 - (45%)
Similarity:351/538 - (65%) Gaps:2/538 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NKALAFTLEERQRLCIHGLMPACVRTYDEQMLAIESNFHSFESNVGRYRYLRALRQGYERLYFQF 120
            ||.:|||||||.:|.||||:|.|..:.|.|:|.:..::.:..:.:.:|..|..|:...|:|:::.
Zfish    59 NKGMAFTLEERLQLGIHGLLPPCFLSQDVQVLRVMKSYETRSNPLDKYILLMTLQDRNEKLFYRV 123

  Fly   121 VSKNVHAVLPIIYTPTVGLACTVYGMLYRGMTGIHITKHDRGHMKQILSNWPMRRSVKAICVTDG 185
            ::.::...:||:|||||||||..||:.:|...|:.||.||:||:..:|::|| ...:|||.||||
Zfish   124 LTSDIEEFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDKGHIATMLNSWP-EEDIKAIVVTDG 187

  Fly   186 QRILGLGDLGANGMGIAVGKMELYTALAGIPPSMLLPICLDVGTNNKSLHEDPLYIGLRDERLKG 250
            :|||||||||..||||.|||:.||||..|:||...||:.|||||:|::|.:|||||||:.:|::|
Zfish   188 ERILGLGDLGGYGMGIPVGKLALYTACGGVPPQQCLPVLLDVGTDNQTLLDDPLYIGLKHKRVRG 252

  Fly   251 DEYVCFVDEFMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYCHFNDDIQGTAAVGLGGLLG 315
            .||...:||||:||...:|...||.|||||..|||..||:|::.||.|||||||||:|.:.|:|.
Zfish   253 KEYDDLIDEFMQAVTDKYGMNCLIQFEDFANSNAFRILNKYRNRYCTFNDDIQGTASVAVAGILA 317

  Fly   316 IQRITKKPLEEHVIVFAGAGSAAMGIAYLLKMELMSRGLSEADAAKNIYFYDQDGVLTTARKSIP 380
            ..:|||..|.:|..||.|||.||:|||:||.|.:...|:..|:||:.|:..|..|::...|..:.
Zfish   318 ALKITKNKLSDHKFVFQGAGEAALGIAHLLIMAMAKEGIPHAEAAQRIWMVDSKGLIVKGRSHLN 382

  Fly   381 DILCVFAKNMKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIRTMAASHERPGIFAFSNPTIKS 445
            .....||.:....|:||.:||.:||:.|:|..:..|.||||||:.|||::|||.|||.||||.|:
Zfish   383 HEKEEFAHDHPHIKTLEEVVETIKPTAIIGVAAIGGAFTEKIIKNMAANNERPIIFALSNPTSKA 447

  Fly   446 ECTAEQAYKFSDGKAIYSAGSPFPPVEF-NGKRLTPGQANNCFAFPALVLATMTVLATRMPDEIF 509
            ||||||.|..::|:.|:::||||..|.. :|:...|||.||.:.||.:.|..:......:.|:||
Zfish   448 ECTAEQCYTLTEGRGIFASGSPFKKVTLADGRSFYPGQGNNAYVFPGVALGVIACGVRHISDDIF 512

  Fly   510 LLAAHELAEFPTNEEMQSGRIYPLVKQANEVAYKIGVKVAKYLIENGYAKRNLEPEDVEEYIEKN 574
            |..|..::|..|.|.:..||:||.:|...||::||.||:..:..:.|.|....||:|.|.:|..:
Zfish   513 LTTAEAISEMVTEEHLAEGRLYPPLKTIREVSFKIAVKIVDHAYKQGIASWYPEPKDKEAFILSH 577

  Fly   575 SYKLTYGSSLAETWAYPK 592
            .|...|.|...:::::||
Zfish   578 VYNSDYDSFTLDSYSWPK 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 241/526 (46%)
malic 114..292 CDD:278802 95/177 (54%)
NAD_bind_1_malic_enz 302..576 CDD:133454 115/274 (42%)
me3NP_001082825.1 PLN03129 47..587 CDD:215594 242/528 (46%)
malic 113..294 CDD:278802 95/181 (52%)
NAD_bind_1_malic_enz 304..580 CDD:133454 115/275 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595260
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.710

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