DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Menl-1 and Men-b

DIOPT Version :9

Sequence 1:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001163750.1 Gene:Men-b / 43936 FlyBaseID:FBgn0029155 Length:624 Species:Drosophila melanogaster


Alignment Length:561 Identity:268/561 - (47%)
Similarity:367/561 - (65%) Gaps:11/561 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DTIRVPIEVVFSDKCNKALAFTLEERQRLCIHGLMPACVRTYDEQMLAIESNFHSFESNVGRYRY 105
            |.||.|       :.||.|||||||||.|.||||.||..:|.:||:...:...:.:...:.:|.|
  Fly    55 DHIRDP-------RLNKGLAFTLEERQTLGIHGLQPARFKTQEEQLQLCKIAVNRYTEPLNKYLY 112

  Fly   106 LRALRQGYERLYFQFVSKNVHAVLPIIYTPTVGLACTVYGMLYRGMTGIHITKHDRGHMKQILSN 170
            |..|....|||:|:|:|:|:..::||:|||||||||..:|::||...|:.||.:||||:..::.|
  Fly   113 LSDLYDRNERLFFRFLSENIEDLMPIVYTPTVGLACQRFGLIYRRPHGLFITYNDRGHIFDVMKN 177

  Fly   171 WPMRRSVKAICVTDGQRILGLGDLGANGMGIAVGKMELYTALAGIPPSMLLPICLDVGTNNKSLH 235
            || ..:|:|||||||:||||||||||.||||.|||:.||||||||.|...|||.:||||||..|.
  Fly   178 WP-EPNVRAICVTDGERILGLGDLGACGMGIPVGKLALYTALAGIKPHQCLPIVVDVGTNNIDLL 241

  Fly   236 EDPLYIGLRDERLKGDEYVCFVDEFMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYCHFND 300
            |||||:|||.:|:.|.||..|:||||||||..:|..|||.||||...|||.||::|::.||.|||
  Fly   242 EDPLYVGLRQKRVVGREYDEFIDEFMEAVVQRYGQNTLIQFEDFGNHNAFRFLDKYRNTYCTFND 306

  Fly   301 DIQGTAAVGLGGLLGIQRITKKPLEEHVIVFAGAGSAAMGIAYLLKMELMSRGLSEADAAKNIYF 365
            ||||||:|.:.||...:|||.|..:::..:|||||.||:|||.|....::..|:...:|...||.
  Fly   307 DIQGTASVAVAGLYASKRITGKSFKDYTFLFAGAGEAAIGIADLTVKAMVQDGVPIEEAYNRIYM 371

  Fly   366 YDQDGVLTTARK--SIPDILCVFAKNMKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIRTMAA 428
            .|.||:||.:||  ::......:||::.....|..:|..:|||:::||::|.|:||.:|:||||.
  Fly   372 VDIDGLLTKSRKVGNLDGHKIHYAKDINPMSDLAEIVSTIKPSVLIGASAAAGIFTPEILRTMAD 436

  Fly   429 SHERPGIFAFSNPTIKSECTAEQAYKFSDGKAIYSAGSPFPPVEFNGKRLTPGQANNCFAFPALV 493
            ::|||.:||.||||.|:|||||.|||.:|.:.|:|:|||||||:...|...|||.||.:.||.:.
  Fly   437 NNERPVVFALSNPTSKAECTAEDAYKHTDARVIFSSGSPFPPVQIGDKTFYPGQGNNAYIFPGVG 501

  Fly   494 LATMTVLATRMPDEIFLLAAHELAEFPTNEEMQSGRIYPLVKQANEVAYKIGVKVAKYLIENGYA 558
            |..:......:|||:||:||.|||.|....:::.|.:||.:.....|:..|.|.|.|...:.|.|
  Fly   502 LGVICTGTHHIPDEMFLIAAQELANFVEPSDIERGSLYPPLSSIRNVSMNIAVGVTKCAYDRGLA 566

  Fly   559 KRNLEPEDVEEYIEKNSYKLTYGSSLAETWAYPKMKPHPST 599
            ....||:|..:::|...|...|.||:..:|.:|:| |:..|
  Fly   567 STYPEPQDKRKWLENQLYNFNYESSMPASWVWPRM-PYIKT 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 261/542 (48%)
malic 114..292 CDD:278802 109/177 (62%)
NAD_bind_1_malic_enz 302..576 CDD:133454 114/275 (41%)
Men-bNP_001163750.1 PLN03129 51..590 CDD:215594 261/542 (48%)
malic 117..298 CDD:278802 109/181 (60%)
NAD_bind_1_malic_enz 308..585 CDD:133454 114/276 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469224
Domainoid 1 1.000 213 1.000 Domainoid score I85
eggNOG 1 0.900 - - E1_COG0281
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 435 1.000 Inparanoid score I37
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - otm51392
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - P PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
109.790

Return to query results.
Submit another query.