DRSC/TRiP Functional Genomics Resources

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Protein Alignment Menl-1 and men-1

DIOPT Version :9

Sequence 1:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_496968.1 Gene:men-1 / 175079 WormBaseID:WBGene00012983 Length:620 Species:Caenorhabditis elegans


Alignment Length:564 Identity:251/564 - (44%)
Similarity:357/564 - (63%) Gaps:14/564 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IEVVFSDKCNKALAFTLEERQRLCIHGLMPACVRTYDEQMLAIESNFHSFESNVGRYRYLRALRQ 111
            |:::.|...||.:||:|.|||.|.:|||:|....|.::|...|.:.......|:.:|..|.:|:.
 Worm    52 IDLLKSPGLNKGMAFSLHERQYLGVHGLLPPAFMTEEQQAYRIITKLRQQPDNLAKYIQLDSLQD 116

  Fly   112 GYERLYFQFVSKNVHAVLPIIYTPTVGLACTVYGMLYRGMTGIHITKHDRGHMK--QILSNWPMR 174
            ..|:||::.:..||..::||:||||||.||..:|.:||...|::||.:|....|  |||:||| .
 Worm   117 RNEKLYYRVLCDNVKELMPIVYTPTVGQACQHFGFIYRNPKGLYITINDNSISKIHQILANWP-T 180

  Fly   175 RSVKAICVTDGQRILGLGDLGANGMGIAVGKMELYTALAGIPPSMLLPICLDVGTNNKSLHEDPL 239
            .:|:||.:|||:|||||||||..|:||.|||:.||.|||||.|...||:.|||||:|..|..||.
 Worm   181 ENVRAIVITDGERILGLGDLGTYGIGIPVGKLALYVALAGIRPEWCLPVILDVGTDNSELLNDPF 245

  Fly   240 YIGLRDERLKGDEYVCFVDEFMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYCHFNDDIQG 304
            |.|||.:|::|.||...||.||:|....||..|||.||||...||:..|:||:..||.|||||||
 Worm   246 YTGLRRKRVRGPEYDTLVDNFMKAATKRFGRDTLIQFEDFGNQNAYRLLDRYKGEYCMFNDDIQG 310

  Fly   305 TAAVGLGGLLGIQRITKKPLEEHVIVFAGAGSAAMGIAYLLKMELMSRGLSEADAAKNIYFYDQD 369
            ||||.:.|||...|||||.|.:..|||.|||.||.|:|.:...::|..||||.:|...||..|.:
 Worm   311 TAAVVVAGLLASTRITKKKLSQERIVFLGAGGAATGVAEMCVRQMMDEGLSEEEACGRIYMVDIE 375

  Fly   370 GVLTTAR-KSIPDILCVFAKNMKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIRTMAASHERP 433
            |::||:| ||:.:....|||::.:||:|..:|:.|||..::||::..|.|||.||:.||..:.||
 Worm   376 GLITTSRSKSLGERHVKFAKDLPDTKNLLEVVKTVKPGALIGASTVAGAFTEDIIKEMARLNPRP 440

  Fly   434 GIFAFSNPTIKSECTAEQAYKFSDGKAIYSAGSPFPPVEFNGKRLTPGQANNCFAFPALVLATMT 498
            .|||.||||.|:|||||.||:.::|..::::||||..||.|||...|||.||.:.||.:.|..:.
 Worm   441 IIFALSNPTSKAECTAETAYRCTNGAVLFASGSPFENVEMNGKLYKPGQGNNAYIFPGVALGAVL 505

  Fly   499 VLATRMPDEIFLLAAHELAEFPTNEEMQS-GRIYPLVKQANEVAYKIGVKVAKYLIENGYAKRNL 562
            .....:||::|||||..:||..:.:.:.: .|:||.:|...|::.||.|:|.:|...:..|..:.
 Worm   506 FRTKNIPDKLFLLAARMVAEAVSEKSLNTYSRVYPRLKDIRELSVKIAVEVGEYCYRHDLATLHP 570

  Fly   563 EPEDVEEYIEKNSYKLTYGSSLAETWAYPKMKPHPSTAGHENKH 606
            :|:|:|.:|.:|.|.:.|...:.:|:.:|         ..::||
 Worm   571 KPDDMEMFIRQNLYSVEYDELINKTYEWP---------AKDSKH 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 247/538 (46%)
malic 114..292 CDD:278802 95/179 (53%)
NAD_bind_1_malic_enz 302..576 CDD:133454 121/275 (44%)
men-1NP_496968.1 PLN03129 46..592 CDD:215594 247/540 (46%)
malic 115..298 CDD:278802 95/183 (52%)
Malic_M 308..560 CDD:281882 114/251 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166735
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.750

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