DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Menl-1 and Me1

DIOPT Version :9

Sequence 1:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_032641.2 Gene:Me1 / 17436 MGIID:97043 Length:572 Species:Mus musculus


Alignment Length:537 Identity:248/537 - (46%)
Similarity:348/537 - (64%) Gaps:2/537 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NKALAFTLEERQRLCIHGLMPACVRTYDEQMLAIESNFHSFESNVGRYRYLRALRQGYERLYFQF 120
            ||.|||||||||:|.||||:|.|:.:.:.|:|.|..||....|:..||..|..|:...|:|::..
Mouse    25 NKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKLFYSV 89

  Fly   121 VSKNVHAVLPIIYTPTVGLACTVYGMLYRGMTGIHITKHDRGHMKQILSNWPMRRSVKAICVTDG 185
            :..:|...:||:|||||||||..|.:.:|...|:.|:.||:||:..:|:.|| ...||||.||||
Mouse    90 LMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWP-EDVVKAIVVTDG 153

  Fly   186 QRILGLGDLGANGMGIAVGKMELYTALAGIPPSMLLPICLDVGTNNKSLHEDPLYIGLRDERLKG 250
            :|||||||||.|||||.|||:.||||..|:.|...|||.|||||.|:.|.:||||||||..|::|
Mouse   154 ERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPLYIGLRHRRVRG 218

  Fly   251 DEYVCFVDEFMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYCHFNDDIQGTAAVGLGGLLG 315
            .||..|:||||||..|.:|...||.|||||..|||..||:|::.||.|||||||||:|.:.|||.
Mouse   219 PEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLA 283

  Fly   316 IQRITKKPLEEHVIVFAGAGSAAMGIAYLLKMELMSRGLSEADAAKNIYFYDQDGVLTTARKSIP 380
            ..||||..|.:..::|.|||.||:|||:|:.|.:...|||:.:|.|.|:..|..|::...|.|:.
Mouse   284 ALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSKENARKKIWLVDSKGLIVKGRASLT 348

  Fly   381 DILCVFAKNMKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIRTMAASHERPGIFAFSNPTIKS 445
            :...|||...:|.|:||.:|:::||:.::|..:..|.|||:|::.|||.:|||.|||.||||.|:
Mouse   349 EEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFALSNPTSKA 413

  Fly   446 ECTAEQAYKFSDGKAIYSAGSPFPPVEF-NGKRLTPGQANNCFAFPALVLATMTVLATRMPDEIF 509
            ||:|||.||.:.|:||:::||||.||.. :|:.|.|||.||.:.||.:.|..:......:.|::|
Mouse   414 ECSAEQCYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVF 478

  Fly   510 LLAAHELAEFPTNEEMQSGRIYPLVKQANEVAYKIGVKVAKYLIENGYAKRNLEPEDVEEYIEKN 574
            |..|..:::..:::.:|.||:||.:.....|:.||.||:.:...:...|....||::.||::...
Mouse   479 LTTAEVISQQVSDKHLQEGRLYPPLNTIRGVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQ 543

  Fly   575 SYKLTYGSSLAETWAYP 591
            .|...|...|.:.:.:|
Mouse   544 MYSTNYDQILPDCYPWP 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 246/526 (47%)
malic 114..292 CDD:278802 99/177 (56%)
NAD_bind_1_malic_enz 302..576 CDD:133454 110/274 (40%)
Me1NP_032641.2 PLN03129 2..551 CDD:215594 246/526 (47%)
malic 79..260 CDD:278802 99/181 (55%)
NAD_bind_1_malic_enz 270..547 CDD:133454 111/276 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849536
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.710

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