DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Menl-1 and LOC101882012

DIOPT Version :9

Sequence 1:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_005174595.1 Gene:LOC101882012 / 101882012 -ID:- Length:363 Species:Danio rerio


Alignment Length:343 Identity:133/343 - (38%)
Similarity:208/343 - (60%) Gaps:4/343 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 DEYVCFVDEFMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYCHFNDDIQGTAAVGLGGLLG 315
            :|.:.|::.|   ||:.:|.:.||.|||||..|||..|::|::.|..|||||||||:|.:.|||.
Zfish    14 EEIILFINAF---VVNRYGMKCLIQFEDFANINAFRLLSKYRNKYLTFNDDIQGTASVAVAGLLA 75

  Fly   316 IQRITKKPLEEHVIVFAGAGSAAMGIAYLLKMELMSRGLSEADAAKNIYFYDQDGVLTTARKSIP 380
            ..||||..:.:|.|||.|||.|||||..|:.|.:...||......|.|:..|..|::...|..:.
Zfish    76 ALRITKSKMCDHTIVFQGAGEAAMGIGELIVMAMEKEGLPREQCIKKIWMVDSKGLIVKGRDHLT 140

  Fly   381 DILCVFAKNMKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIRTMAASHERPGIFAFSNPTIKS 445
            .....||....:.|.||.:|:::||:.|:|..:..|.|||:||::||:.::.|.|||.||||.|:
Zfish   141 HEKERFAHEHAQMKKLEDVVKELKPTAIIGVAAIAGAFTEEIIKSMASFNKNPIIFALSNPTSKA 205

  Fly   446 ECTAEQAYKFSDGKAIYSAGSPFPPVEF-NGKRLTPGQANNCFAFPALVLATMTVLATRMPDEIF 509
            ||||||.|..::|:.|:::||||.||.. :|::..|||.||.:.||.:.|.........:|:::|
Zfish   206 ECTAEQCYTLTEGRGIFASGSPFDPVTLPDGRKFYPGQGNNSYVFPGVGLGVTACEMRHIPEDVF 270

  Fly   510 LLAAHELAEFPTNEEMQSGRIYPLVKQANEVAYKIGVKVAKYLIENGYAKRNLEPEDVEEYIEKN 574
            |:.|..:||..|::::..||:||.:....||:.|:.||:.:|..::..|..:.||:|.:.:|...
Zfish   271 LVTAEAIAELVTDKDLAEGRLYPPLSSIREVSIKLAVKIVEYAYKHKMATLHPEPQDKDAFIRSL 335

  Fly   575 SYKLTYGSSLAETWAYPK 592
            .|...|.....:::::|:
Zfish   336 IYSTDYQEFAVDSYSWPE 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 132/331 (40%)
malic 114..292 CDD:278802 17/40 (43%)
NAD_bind_1_malic_enz 302..576 CDD:133454 107/274 (39%)
LOC101882012XP_005174595.1 malic <7..52 CDD:278802 17/40 (43%)
NAD_bind_1_malic_enz 62..339 CDD:133454 108/276 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595250
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.