DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2A:CG33820 and h2ax.2

DIOPT Version :10

Sequence 1:NP_001027311.1 Gene:His2A:CG33820 / 3772541 FlyBaseID:FBgn0053820 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001015968.1 Gene:h2ax.2 / 548722 XenbaseID:XB-GENE-855944 Length:143 Species:Xenopus tropicalis


Alignment Length:121 Identity:108/121 - (89%)
Similarity:115/121 - (95%) Gaps:1/121 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLE 64
            |||||| |||.:.|||:||:||||||||||:||||||||||||||||||||||||:|||.||:||
 Frog     1 MSGRGKTGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILE 65

  Fly    65 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
            ||||||||||||||||||||||:||||||||||.||||||||||||||.|||||||
 Frog    66 LAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQTVLLPKKT 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33820NP_001027311.1 PTZ00017 16..124 CDD:185399 96/105 (91%)
h2ax.2NP_001015968.1 PTZ00017 1..122 CDD:185399 108/121 (89%)

Return to query results.
Submit another query.