DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11889 and pkdc

DIOPT Version :10

Sequence 1:NP_651367.1 Gene:CG11889 / 3772506 FlyBaseID:FBgn0039308 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_001335286.1 Gene:pkdc / 797003 ZFINID:ZDB-GENE-041111-115 Length:322 Species:Danio rerio


Alignment Length:231 Identity:51/231 - (22%)
Similarity:84/231 - (36%) Gaps:60/231 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 ERDSIMFEDLSLERYKVACRVKKLDLEHTYL-------VLEKLADFHAAGAALAQRQPGIFEKNY 189
            |...|:.|||.:..:.|         ..||:       .|..:|:|||.                
Zfish   106 EEQLIVLEDLDVAGFPV---------RKTYVNDAEIKACLSWIANFHAL---------------- 145

  Fly   190 DRGFFNKHVRGYEPIMKN-ILKALSRTLDLSPDLKERYQA-KIDRLIDNVMDYGERSTSVAPGDF 252
               |.:....|..||... .|:.....|:...|.|.:..| :||.:::|..             |
Zfish   146 ---FLDVTPEGLWPIGTYWHLETRPEELEAMSDQKLKAAAGEIDSILNNCR-------------F 194

  Fly   253 VTLAHGDIWTTNVMFQYDDEGHPVNAIFIDFQFSVWNSPAIDLQYFFSTSIHENLRLERQTELVQ 317
            .|:.|||....|..|..|.    :....:|||:........|:.||..:.:.|....::...|:.
Zfish   195 KTIVHGDAKLANFCFSKDG----LQVASVDFQYVGGGCGMKDVIYFLGSCMDERECEKKAPGLLD 255

  Fly   318 FYFYKLVVALERVKYSGKVPSLFEFQQQFRTKGFYA 353
            :||.:|..:||:     || ...|.::::|....:|
Zfish   256 YYFSELRKSLEK-----KV-DFAELEKEWRNMFAFA 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11889NP_651367.1 EcKL 44..332 CDD:397213 46/208 (22%)
pkdcXP_001335286.1 Protein Kinases, catalytic domain <96..267 CDD:473864 45/205 (22%)

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