DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr59e and Asic3

DIOPT Version :9

Sequence 1:NP_788431.1 Gene:Gr59e / 37725 FlyBaseID:FBgn0041233 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_038963092.1 Gene:Asic3 / 286920 RGDID:708578 Length:564 Species:Rattus norvegicus


Alignment Length:87 Identity:19/87 - (21%)
Similarity:33/87 - (37%) Gaps:40/87 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 KELKLLQRPPQGSTK-------------------LDACYE----------SAFAV---LVDAGG- 221
            |||.:::.|.:.|.:                   ||..:|          :|:.|   |.|.|| 
  Rat   379 KELSMVRIPSRASARYLARKYNRSESYITENVLVLDIFFEALNYEAVEQKAAYEVSELLGDIGGQ 443

  Fly   222 -----GSALM--IEEMRYTCNL 236
                 |::|:  :|.:.|.|.:
  Rat   444 MGLFIGASLLTILEILDYLCEV 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59eNP_788431.1 7tm_7 9..381 CDD:285581 19/87 (22%)
Asic3XP_038963092.1 ASC 17..547 CDD:413546 19/87 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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