DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr59e and Scnn1b

DIOPT Version :9

Sequence 1:NP_788431.1 Gene:Gr59e / 37725 FlyBaseID:FBgn0041233 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus


Alignment Length:107 Identity:23/107 - (21%)
Similarity:45/107 - (42%) Gaps:22/107 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 QIERIITGLKGKAKRLVY-KRHGQRTL-HLMATTLVFHGLCVLVDVVNYDFEFWTTWSSNSVYNL 159
            |...|....||..|..:| :....||: ...|..:|:     |:..:...|.||          :
  Rat   479 QSSNITLSRKGIVKLNIYFQEFNYRTIEESPANNIVW-----LLSNLGGQFGFW----------M 528

  Fly   160 PGLMMSLGVLQYAQ-PVHFLWLVMDQMRMCLKELKLLQRPPQ 200
            .|.::.|  :::.: .:.|:|:.:.::....|.|:  :|.||
  Rat   529 GGSVLCL--IEFGEIIIDFIWITVIKLVASCKGLR--RRRPQ 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59eNP_788431.1 7tm_7 9..381 CDD:285581 23/107 (21%)
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 23/107 (21%)
deg-1 29..538 CDD:273309 16/75 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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