DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr59e and flr-1

DIOPT Version :9

Sequence 1:NP_788431.1 Gene:Gr59e / 37725 FlyBaseID:FBgn0041233 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_510243.1 Gene:flr-1 / 181468 WormBaseID:WBGene00001465 Length:638 Species:Caenorhabditis elegans


Alignment Length:330 Identity:67/330 - (20%)
Similarity:114/330 - (34%) Gaps:89/330 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 KAKRLVYKRHGQRTLHLMATTLVFHGLCVLVDVVNYDFEFWTTWSSN-----------SVYNLPG 161
            :::|:..:.:...|......| .:||   ||.:.|.:     ||.|.           |::.:..
 Worm     6 ESERIYLQLYDYETKEFSGLT-TYHG---LVRIYNSN-----TWPSRIFWVVVVLSCLSLFMIHS 61

  Fly   162 LMMSLGVLQYAQPVHFLWLVMDQMR-MCLKELKLLQRPPQGSTKLDACYESAFAVLVDAGGGSAL 225
            ..:.||  .:|:|..|....:..|. :...|:.:....|..:|||:....|........|....:
 Worm    62 GYLLLG--YHAKPTLFQTNTIVPMNGLLFPEVTICNLNPLNTTKLEELNISKSTWTYIFGYFDEI 124

  Fly   226 MIEEMRYTCNLIEQVHSQFLLRFGLYL--------VLNLLNSLVSICVELYLIFNF--------- 273
            ...|.:.| .|.|:   |||.....|.        |.|.|.|:...|.|.::..:|         
 Worm   125 TTSEHKST-KLGEE---QFLEIMNNYQELTKQEFNVKNFLKSVSKSCEETFISCSFGREKLHNCC 185

  Fly   274 --FETPLWEESVLLVYRL--------LWLAMHGGRIWFILSVNEQILEQKCNLCQLLNELEVCSS 328
              ..|.:.|..|  .:||        .|.:.:|....|:|:.|              ||::..:.
 Worm   186 EHVTTEMTEVGV--CFRLSNVNKKYRQWYSGNGFGWEFVLNGN--------------NEIDDHAD 234

  Fly   329 RLQRTINR-FLLQLQRSIDQP-LEACGIVTLDTRSLGGFIGVLMAIVIFLIQIGLGNKSLMGVAL 391
            .|....:| ||:.:..|...| :.:.|:.......|..             .|.:.|.||    |
 Worm   235 SLDFEPDRGFLIMVHESEKYPKINSYGVAVSPDSQLHA-------------AISMKNISL----L 282

  Fly   392 NRSNW 396
            :::||
 Worm   283 DKANW 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59eNP_788431.1 7tm_7 9..381 CDD:285581 61/313 (19%)
flr-1NP_510243.1 ASC 22..450 CDD:279230 65/314 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.