DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr59e and lite-1

DIOPT Version :10

Sequence 1:NP_788431.1 Gene:Gr59e / 37725 FlyBaseID:FBgn0041233 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:489 Identity:93/489 - (19%)
Similarity:152/489 - (31%) Gaps:210/489 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YWENLLLTINRFLGVYPSGRVGVLRWLHTLWSLFLLMYIWTGSIVKC-LEFTVEIPTIEKLLY-- 66
            |:..|:|.:|:  .:.|:.            ||...:|.|   :|.| |.||    |:.|...  
 Worm    52 YYLLLILGLNQ--SIRPNN------------SLLFRIYSW---LVFCLLLFT----TLRKFNQVG 95

  Fly    67 ---------LMEF---PGNMATI--AILVYYAVLNRPLAHGAELQIERIITGLKGKAKRL----- 112
                     |.||   |.:|.|:  |:::...:|       |.||:..:      .||||     
 Worm    96 VRPNGTRENLQEFFANPRSMITLCNALIMLSGLL-------ASLQLYTL------GAKRLKPLKI 147

  Fly   113 -------VYKRHGQRTLHLMATTL-VFHGLCVLVDVVNYDFEFWTTWSSNSVYNLPGLMMSLGVL 169
                   |..:..:|...::.|.| ||.||..|.....|....|.                    
 Worm   148 LCQFSLNVRTKQAERRQFMINTFLAVFSGLLALTMAATYAMSKWG-------------------- 192

  Fly   170 QYAQPVHFLWLVMDQMRMCLKELKLLQRPPQGSTKLDACYESAFAVLVDA-------GGGSAL-- 225
                  :.|::|                   |:..||.  |:.|.||:|:       ...|||  
 Worm   193 ------YILYIV-------------------GTPNLDT--ETIFCVLLDSYALFVSRAAISALAI 230

  Fly   226 ---------------MIEEM----RYTCNL----IEQVHS---QFLLRFGLYLVLNLLNSLV--- 261
                           :|.||    :..|.|    ::::|.   .:...|....|:....|.|   
 Worm   231 LFYQHCSVIRRSIKHLINEMVPAEQDECPLPESSLQKIHDCQISYQRIFNGKAVIEEYYSFVLFY 295

  Fly   262 --SICVELYLIFNFF----ETPLWEESVLLVYRLLWLAMHGGRIWFILSV--------------- 305
              .:|:.::....|.    ::..|.|.|.:|            ||.:.::               
 Worm   296 SYGVCIPIFCFLMFVGMSAQSICWSEVVSIV------------IWIVNAILVLLLFSLPAFMINE 348

  Fly   306 -------------NEQILEQKCNLCQLLNELEVCSSRLQRTINRFLLQLQRSIDQPLEACGIVTL 357
                         :|...|::        :|.|.|   |.|.  |..|: .|....|.||....:
 Worm   349 DGDRLVASSFRMYHETFHEER--------DLTVLS---QMTF--FTFQI-HSTKLTLSACNYFYM 399

  Fly   358 DTRSLGGFIGVLMAIVIFLIQIGL-GNKSLMGVA 390
            |...|......::...:.|.:..: .|:||..:|
 Worm   400 DRSILLSLFSAILTYFLILWEFDIKNNQSLQNIA 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59eNP_788431.1 7tm_7 9..381 CDD:462463 88/473 (19%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 82/442 (19%)

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