DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy-2 and Slc13a1

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_113839.1 Gene:Slc13a1 / 58980 RGDID:61919 Length:595 Species:Rattus norvegicus


Alignment Length:618 Identity:179/618 - (28%)
Similarity:294/618 - (47%) Gaps:100/618 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKFVLGRCCIFHWRGKASIIIPLITLPILIYGFQTDMAEFKCLWLIVTMALLWITETLPIYVTAL 72
            |:|:|   .:|       .::.|:.||::|..     .|.:|.:::..:|..||||.||:.:|||
  Rat    11 RRFLL---VVF-------TVLVLLPLPLIIRS-----KEAECAYILFVIATFWITEALPLSITAL 60

  Fly    73 FPLVFCPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFV 137
            .|.:..|:.|:::::.|...||.|..::.:|.:.:|..||..|||.|||||::.:||.:|..|.:
  Rat    61 LPGLMFPMFGIMSSTHVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALRMVMMVGVNPAWLTL 125

  Fly   138 GLMSVSTFMGLWISNSAGTAMMCPIVKALVN-----ELDTNKIFPVYMTQE-------------E 184
            |.||.:.|:.:|:||::..||:.|||:|:..     |.:.......|..:.             :
  Rat   126 GFMSSTAFLSMWLSNTSTAAMVMPIVEAVAQQITSAEAEAEATQMTYFNESAAQGLEVDETIIGQ 190

  Fly   185 EPVEEGEPPHP-------------------SKITVAFYAG-------------IAYASSIGGLGT 217
            |..|..|...|                   :.:|.|.|..             |||:|:||||.|
  Rat   191 ETNERKEKTKPALGSSNDKGKVSSKMETEKNTVTGAKYRSKKDHMMCKLMCLCIAYSSTIGGLTT 255

  Fly   218 LIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSIPLMVIVNVTLVIIAFLITH---MGL-FRPN 278
            :.||.|||:|...:..|:|.... :.|.::..:|.|:.||    |::::::...   :|. |:..
  Rat   256 ITGTSTNLIFSEHFNTRYPDCRC-LNFGSWFLFSFPVAVI----LLLLSWIWLQWLFLGFNFKEM 315

  Fly   279 SKTGKIIAEANTNRKLMEDVLRQRHIDLGPMSCHEIQMAIAFAFMIVLLITRKPGFVPGWSDL-- 341
            .|.||   ......|...:|::|.:..||||...||...:.|..|.:|..:|.||||.|||.|  
  Rat   316 FKCGK---TKTLKEKACAEVIKQEYEKLGPMRYQEIVTLVIFIVMALLWFSRDPGFVTGWSVLFS 377

  Fly   342 -----INRKVVGSASGLSFIVLLIFALP----TQYTFFKYCCGKGPFTAQAIDAILSWEYVLRNI 397
                 :....|...:|     :|.|.:|    |:.|      ..|...|.....:::|:.....:
  Rat   378 EYPGYVTDSTVALVAG-----ILFFLIPAKKLTKMT------STGDIIAFDYSPLITWKEFQSFM 431

  Fly   398 PWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVANI 462
            ||.:..|:|||||||...:.:||:..|...:..|..||..::..|:.::....:...:|.....|
  Rat   432 PWDIAILVGGGFALADGCQVSGLSSWIGSKLSPLGSLPVWLIILISSLIVTSLTEVASNPATITI 496

  Fly   463 VLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTIIG 527
            :.|||..::.|:.::||.:.||:.|..|..:.|||:.||||||..|.|:|.......|:...|:|
  Rat   497 LFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILG 561

  Fly   528 ISVALVNTNTWGLIIFPESKSFPDWAKEIKNQT 560
            ::|.::...||...:| ....:|.||.:|.|||
  Rat   562 VAVVMLGMFTWIEPMF-NLHEYPSWAPDIVNQT 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 159/547 (29%)
dass 52..532 CDD:273267 159/544 (29%)
Slc13a1NP_113839.1 SLC13_permease 38..567 CDD:238535 159/547 (29%)
CitT 40..573 CDD:223547 160/551 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..218 4/27 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340612
Domainoid 1 1.000 365 1.000 Domainoid score I904
eggNOG 1 0.900 - - E1_COG0471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 376 1.000 Inparanoid score I2018
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm8961
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X273
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.860

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