DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy-2 and slc13a3

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_031749933.1 Gene:slc13a3 / 548493 XenbaseID:XB-GENE-5765054 Length:602 Species:Xenopus tropicalis


Alignment Length:601 Identity:202/601 - (33%)
Similarity:310/601 - (51%) Gaps:70/601 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKFVLGRCCIFHWRGKASIIIPLITLPILIYGFQTDMAEFKCLWLIVTMALLWITETLPIYVTAL 72
            ||:|:            .|..|||.||:|   |.....|.|||::::.||..|.||.||:.||||
 Frog    15 RKYVI------------LIATPLILLPVL---FSLPPKEGKCLFVVLLMAFYWCTEALPLAVTAL 64

  Fly    73 FPLVFCPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFV 137
            .|:|..||||::.:|.||.|||.||..:||.||::|..||..|||.||||:|:.:||..|.||.:
 Frog    65 LPIVLFPLLGILPSSKVCPQYFLDTNFLFLSGLLMAAAIEEWNLHRRIALKVLTLVGVQPARLIL 129

  Fly   138 GLMSVSTFMGLWISNSAGTAMMCPIVKALVNEL-------------------------------- 170
            |:|..:.|:.:|:||:|.||||.||..|::..|                                
 Frog   130 GMMMTTAFLSMWLSNTASTAMMLPIANAILKSLYGERSSKEKGLNNNCDSTASIQEKGLHPVPTE 194

  Fly   171 -------DTNKIFP--VYMTQEEEPVEEGEPPHPSKITVAFYAGIAYASSIGGLGTLIGTGTNLV 226
                   :.||..|  :.:..:..|..:.|..:.::|..||...|.|::||||..||.||..||:
 Frog   195 MQLLAANEENKDLPEKIDIPTDTHPDLQKEKEYQNRIWKAFLISIPYSASIGGTATLTGTAPNLI 259

  Fly   227 FRGIYTERFPTSTVEITFANFMFYSIPLMVI-VNVTLVIIAFLITHMGLFRPNSKTGKIIAEANT 290
            ..|.....||...| :.|.::..::.|||:: :.|..:.|:.|...:.|.....|...|.:||.:
 Frog   260 LLGQLKSFFPGCDV-VNFGSWFAFAFPLMILFLFVGWLWISVLHGAISLRCKRKKKSDIRSEAES 323

  Fly   291 NRKLMEDVLRQRHIDLGPMSCHEIQMAIAFAFMIVLLITRKPGFVPGWSDLINRKVVGSA-SGLS 354
            ..|   |::::.:..|||.:..|..:.:.|....:||.||.|.|:|||:..........| :|:|
 Frog   324 KAK---DIIQEDYRKLGPTNFAEKSVFVFFCLFAILLFTRDPKFIPGWASAFTPGFTSDAVTGIS 385

  Fly   355 FIVLLIFALPTQYTFFKYCCG-KGPFTAQAIDAILSWEYVLRNIPWGLLFLLGGGFALAVASRET 418
            ..::|.| .|::....|:... |.|.|..  .|:|||:.....:||.::.|||||||:|.....:
 Frog   386 ICIVLFF-FPSEKPSLKWWFDLKAPNTEN--KALLSWKKAQSTVPWNIILLLGGGFAMAKGCEVS 447

  Fly   419 GLNIMISKAMQVLIGL-PNIVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILT 482
            ||:..|...:|.|.|: |.:.|..:|.::|: |:.|.:|.....:.||||.|:::.|:::||.|.
 Frog   448 GLSTWIGSRLQPLEGISPALAVLLVTVLIAS-FTEFASNTATIIVFLPILSELAIRLKVNPLYLM 511

  Fly   483 LPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTIIGISVALVNTNTWGLIIFPESK 547
            :|..:|.|..:.||||||||:|.....|:..|..|..|:|..::|:.:..:..|||...|| :..
 Frog   512 VPGTVGCSYAFMLPVSTPPNSIAFSTGHLMVKDMAKTGLVMNLMGVLLLSLAMNTWATSIF-QLG 575

  Fly   548 SFPDWA-KEIKNQTKI 562
            :.|||. ..|.|.|::
 Frog   576 TIPDWVPSHIYNVTEL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 177/527 (34%)
dass 52..532 CDD:273267 176/524 (34%)
slc13a3XP_031749933.1 ArsB_NhaD_permease 9..567 CDD:419678 192/574 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 357 1.000 Domainoid score I978
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2088
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm9386
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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