DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy-2 and slc13a5a

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_005161489.1 Gene:slc13a5a / 503788 ZFINID:ZDB-GENE-030131-4628 Length:582 Species:Danio rerio


Alignment Length:604 Identity:208/604 - (34%)
Similarity:312/604 - (51%) Gaps:93/604 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 WRGKASIII---PLITLPI-LIYGFQTDMAEFKCLWLIVTMALLWITETLPIYVTALFPLVFCPL 80
            |:.|.::|:   |.:.||: |:.|.:    |..|.:::|.||:.|.||.||:.||||.|.|..||
Zfish    11 WKMKNTLILFCTPFLLLPLPLVIGSK----EAGCAYVVVLMAVYWCTEVLPLAVTALLPAVLFPL 71

  Fly    81 LGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFVGLMSVSTF 145
            ..::.:..||.||..||.::|||||:||:.:|:.|||.||||||:.:||..|..|.:|.|.|:.|
Zfish    72 FRIMESKDVCMQYLKDTNMLFLGGLMVAVAVEHWNLHKRIALRVLLLVGVRPALLMLGFMGVTAF 136

  Fly   146 MGLWISNSAGTAMMCPIVKALVNELD-----------------TNKIFPVYMTQEEEPVE----- 188
            :.:||||:|.||||.|||:|::.:|:                 |.|       |.|.|.|     
Zfish   137 LSMWISNTATTAMMVPIVQAVLEQLNNTAQQEQSSIPETEEKSTEK-------QPESPGEEKVVL 194

  Fly   189 -------EGEPPHPS-------KITVAFYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTST 239
                   |.:|...|       |::......:.||:||||..||.|||.|||..|..::.||.:.
Zfish   195 NGDNFSMESDPEEHSREAEERLKMSKGLTLCVCYAASIGGTATLTGTGPNLVLMGQMSQLFPDNP 259

  Fly   240 VEITFANFMFYSIPLMVIVNVTLVIIAFLITHMGL-FRP-----NSKTGKIIAEANTNRKLMEDV 298
            ..|.||::..::.|.|:|: :||..:...|..:|: |:.     ..||.|.||..|        |
Zfish   260 DIINFASWFGFAFPNMIIM-LTLAWLWLQIVFLGINFKKTWGCGTVKTEKEIAAYN--------V 315

  Fly   299 LRQRHIDLGPMSCHEIQMAIAFAFMIVLLITRKPGFVPGWSDLI---NRKVVGSASGLSFIVLLI 360
            :::.|..||||:..|:.:...|..::||..||.||||.||:...   :::.|..|:...|:..|:
Zfish   316 IKEEHRSLGPMTFGELSVLALFILLVVLWFTRDPGFVDGWATRFFNADKEFVTDATVAVFVAALL 380

  Fly   361 FALPTQYTFFKYCCGK------------GPFTAQAIDAILSWEYVLRNIPWGLLFLLGGGFALAV 413
            |..|::..  :.|..:            ||     ..|:|:|:...:.:||.::.|||||||||.
Zfish   381 FVFPSKPP--RLCFWRTESFDTVPQQESGP-----TPALLTWKVTQKKMPWSIILLLGGGFALAK 438

  Fly   414 ASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHP 478
            .|..:||:..:...|..|..:|...:..:..::...|:...:||..|.:.||||..||.::.::|
Zfish   439 GSEISGLSKWLGDQMSPLQSIPPWAIAIVICLMIATFTECTSNVATATLFLPILASMSQSIGVNP 503

  Fly   479 LILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTIIGISVALVNTNTWGLIIF 543
            |.:.:|..|..|..:.|||:|||||||..|.::|....|..|||..||||....:..|:||..||
Zfish   504 LYVMVPCTLSASFAFMLPVATPPNAIVFSYGYLKVSDMAKTGIVMNIIGILSITLAINSWGRAIF 568

  Fly   544 PESKSFPDWAKEIKNQTKI 562
             ...:||.||    |.|.:
Zfish   569 -SLDTFPSWA----NTTDV 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 187/539 (35%)
dass 52..532 CDD:273267 187/536 (35%)
slc13a5aXP_005161489.1 ArsB_NhaD_permease 35..570 CDD:304373 194/562 (35%)
CitT 43..563 CDD:223547 188/542 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580402
Domainoid 1 1.000 381 1.000 Domainoid score I793
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 396 1.000 Inparanoid score I1908
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm6448
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1111.000

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