DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy-2 and slc13a2

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_998617.2 Gene:slc13a2 / 406537 ZFINID:ZDB-GENE-040426-2389 Length:613 Species:Danio rerio


Alignment Length:622 Identity:200/622 - (32%)
Similarity:316/622 - (50%) Gaps:98/622 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKFVLGRCCIFHWRGKASIIIPLITLPILIYGFQTDMAEFKCLWLIVTMALLWITETLPIYVTAL 72
            |.::|..|            :||:.||:.:.   ....|.:|.:.|:.|||.|.||.:|:.:|||
Zfish    17 RNYILILC------------VPLLILPLPLV---LPTPEARCGFAIILMALFWCTECMPLAITAL 66

  Fly    73 FPLVFCPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFV 137
            .|:|..|::|::.:..||.||..||.::|:|||:||:.:|:.|||.||||.|:.:||..|..|.:
Zfish    67 LPVVLFPMMGIMESGKVCVQYLKDTNMLFIGGLLVAIAVEHWNLHKRIALSVLLVVGVRPALLML 131

  Fly   138 GLMSVSTFMGLWISNSAGTAMMCPIVKALVNEL---------------DTNKIF---------PV 178
            |.|.|:.|:.:||||:|.||||.||.:|::.:|               ..|:.|         |:
Zfish   132 GFMIVTAFLSMWISNTATTAMMLPISQAVLEQLSATEADSDEKELREGQVNQAFELTEVNIKQPL 196

  Fly   179 YMTQEEEP-----VEEG--------EPPHPSKITVAFYA---GIAYASSIGGLGTLIGTGTNLVF 227
            ..||.|:|     ||||        .....:|....|..   .:.|::||||..||.||..||:.
Zfish   197 DNTQGEKPNNNADVEEGINALSERRRKAREAKYLRLFKGMSLSVCYSASIGGTATLTGTTPNLIL 261

  Fly   228 RGIYTERFPTSTVEITFANFMFYSIPLMVIVNVTLVIIAFL---ITHMGLFRPNSKTGKIIAEAN 289
            :|...|.||.:...|.||::..::.|.||:    ::::::|   ..::|.   |.|........|
Zfish   262 KGQMDEIFPDNNDVINFASWFGFAFPNMVL----MLVLSWLWLQCMYLGF---NFKQSFGCGTKN 319

  Fly   290 TNRKLMEDVLRQRHIDLGPMSCHEIQMAIAFAFMIVLLITRKPGFVPGW-SDLINR--KVVGSAS 351
            ...|....|::..:..|||||..|..:.:.|.|:::|..||:|||:||| ::|.|:  :.|...:
Zfish   320 EGDKDAYKVMKNEYKKLGPMSFAEGAVLVIFIFLVILWFTREPGFMPGWATELFNKNGQYVTDGT 384

  Fly   352 GLSFIVLLIFALPTQYTFFKYCCGKGPFTAQAIDAI---------------------LSWEYVLR 395
            ...|:..|.|.:|::..|.  |..|  :..|..:|:                     |:|:.|..
Zfish   385 VAIFMSTLFFVIPSRVDFL--CSIK--YEEQDEEAVGEEQDGVEKEKKRKLKGTPTLLNWKVVHE 445

  Fly   396 NIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVA 460
            .:||.::.|||||||||..|.|:||::.:.:::..|..:|...:..|..:|...|:..::|....
Zfish   446 RMPWNIVLLLGGGFALASGSEESGLSVWLGQSLSPLKSIPPFAISIILCLLVGTFTECSSNTATT 510

  Fly   461 NIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTI 525
            .:.||||..|:..:.||||.:.||..:..|:.:.|||:||||||...|.::|....|..|.:..|
Zfish   511 TLFLPILASMATTIGLHPLYVMLPCTISASLAFMLPVATPPNAIAFSYGNLKVLDMAKAGFILNI 575

  Fly   526 IGISVALVNTNTWGLIIFPESKSFPDWAKEIKNQTKI 562
            |||....:..||||:.:| :..:||.||    |.|.:
Zfish   576 IGILCINLGINTWGMAMF-KLDTFPSWA----NNTLV 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 180/549 (33%)
dass 52..532 CDD:273267 180/546 (33%)
slc13a2NP_998617.2 ArsB_NhaD_permease 40..595 CDD:304373 187/566 (33%)
dass 45..588 CDD:273267 181/553 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580414
Domainoid 1 1.000 381 1.000 Domainoid score I793
eggNOG 1 0.900 - - E1_COG0471
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 396 1.000 Inparanoid score I1908
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm6448
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

Return to query results.
Submit another query.