DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy-2 and SPBC3B8.04c

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_596410.1 Gene:SPBC3B8.04c / 2540279 PomBaseID:SPBC3B8.04c Length:867 Species:Schizosaccharomyces pombe


Alignment Length:554 Identity:127/554 - (22%)
Similarity:227/554 - (40%) Gaps:123/554 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FVLGRCCIFHWRGKASIIIPLITLPILIYGFQT--DMAEFKCLWLIVTMALLWITETLPIYVTAL 72
            |.:.||   .:....:.:|.:|.:.||:..|..  :..:..||.|:|.::|||.||.:|::||:.
pombe   396 FRIPRC---FFNSTIATLITIIVIFILLLSFPVIDNREQNNCLALLVMVSLLWATEAIPLFVTSF 457

  Fly    73 ---FPLVF---------CPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVI 125
               |..||         .||.|..:..::....:..|||:.|||..:|..:...::..|:|..::
pombe   458 LVPFMTVFLKILRDENGSPLSGKESTKVIFSSMWNPTIVLLLGGFTIAAALSKYHIAKRLATSIL 522

  Fly   126 RIVGGSPRRLFVGLMSVSTFMGLWISNSAGTAMMCPIVKALVNELDTNKIFPVYMTQEEEPVEEG 190
            ...|..||.:.:..|.|:.|..:||||.|...:...|::.|:..|.....|              
pombe   523 AHAGRKPRSVLLTNMFVAMFASMWISNVAAPVLCFSIIQPLLRNLPAESDF-------------- 573

  Fly   191 EPPHPSKITVAFYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSIPLM 255
                 :||.:   .|||.||::||:.:.|.:..|:|       ..........:..:...|||:.
pombe   574 -----AKILI---VGIALASNVGGIASPISSPQNIV-------ALQNMDPAAGWGEWFAVSIPVS 623

  Fly   256 VIVNVTLVIIAFLITHMGLFRPNSKTGKIIAEANTNRKLMEDVLRQRHIDLGPM-SCHEIQMAIA 319
            ::   .:..|.||:: .||                        |:..||.|..: |..:....:.
pombe   624 LL---CIFSIWFLLS-FGL------------------------LKDEHITLAKIRSTKDTFTGVQ 660

  Fly   320 FAFMIVLLITRKPGFVPGWSDLINRK---VVGSASGLSFIVLLIFALPTQYTFFKYCCGKGPFTA 381
            :...||.:     |.:..|  .:.|:   |.|....::.:.:::|            .|.|..|.
pombe   661 WFISIVTI-----GTIVLW--CLERRFDEVFGDMGVIALVPIIVF------------FGTGLLTK 706

  Fly   382 QAIDAILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPN-----IVVQS 441
            :..:          |..|.::.|..||.||......:||..:|:..:...:...|     ::..:
pombe   707 EDFN----------NFLWTVIVLAMGGVALGKVVSSSGLLELIALKIGNAVSSLNTFRVLLIFSA 761

  Fly   442 ITFVLANFFSAFNANVVVANIVLPILCEMSLAL-ELHPLILTLPACLGISMVYFLPVSTPPN--A 503
            :|.|:::|.|    ::|.|.:||||:.|:...| :.||.:..|.:.:..|:...||.|..||  |
pombe   762 LTLVVSSFIS----HIVAAMVVLPIVHEVGSRLADPHPRLFVLASGMMCSLAMALPTSGFPNMTA 822

  Fly   504 IVTQ----YAHIKTKYFACCGIVPTIIGISVALV 533
            |:.:    ..::|...|...||..|:|...:.|:
pombe   823 IMMENEAGKRYLKVSDFLKAGIPATLISFVILLL 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 117/510 (23%)
dass 52..532 CDD:273267 116/507 (23%)
SPBC3B8.04cNP_596410.1 COG5408 1..301 CDD:227695
SPX_PHO87_PHO90_like 2..282 CDD:269899
CitT 409..861 CDD:223547 124/538 (23%)
SLC13_permease 435..858 CDD:238535 118/512 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 130 1.000 Domainoid score I1327
eggNOG 1 0.900 - - E1_COG0471
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I1393
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

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