DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy-2 and Slc13a4

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_766480.1 Gene:Slc13a4 / 243755 MGIID:2442367 Length:625 Species:Mus musculus


Alignment Length:642 Identity:192/642 - (29%)
Similarity:308/642 - (47%) Gaps:112/642 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQRKFVLGRCCIFHWRGKASIIIPLITLPI-LIYGFQTDMAEFKCLWLIVTMALLWITETLPIYV 69
            :.||.:|..|            :||:.||: .||    ..:|..|.::::..|:.|::|.:|:..
Mouse     9 QARKLLLVIC------------VPLLLLPLPTIY----PTSEAACAYVLLVTAVYWVSEAVPLGA 57

  Fly    70 TALFPLVFCPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRR 134
            .||.|....|..|::.:|.|..:||.:|.::.:|.:.||..:|..|||.|||||::.:.|..|..
Mouse    58 AALVPAFLYPFFGVLRSSEVAAEYFKNTTLLLVGVICVAAAVEKWNLHKRIALRMVLMAGAKPGM 122

  Fly   135 LFVGLMSVSTFMGLWISNSAGTAMMCPIVKALVNE--------------------LDTNK----- 174
            |.:..|..:|.:.:|:||::.|||:.|||:|::.|                    ||.|.     
Mouse   123 LLLCFMCCTTMLSMWLSNTSTTAMVMPIVEAVLQELINAEEEQLAAGTEEAELMGLDVNNRQTSM 187

  Fly   175 --IF----------------------PV----------YMTQEEEPVEE--GEPP---------- 193
              ||                      |:          ...::::|.:|  |.|.          
Mouse   188 ELIFVNEDTSAADFTSLMQSKNLNGVPMVTKSINTANQQQQKKQQPSQEKPGVPTPSSKTQELNK 252

  Fly   194 ------HPSKITVAFYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSI 252
                  |...|.......|:||::||||.|:|||.|:|:|...:..::|.:.| :.|..:..:|.
Mouse   253 KKYRSHHDQMICKCLSLSISYAATIGGLTTIIGTSTSLIFLEHFNNQYPAAEV-VNFGTWFLFSF 316

  Fly   253 PLMVIVNVTLVIIAFLITHMGLFRPNSKTGKIIAEANTNR-KLMEDVLRQRHIDLGPMSCHEIQM 316
            |:.:|:   ||:..|.|..:.|.....:|..:..:..|.| :|.|..:|:.:..||.:|..|:..
Mouse   317 PISLIM---LVVSWFWIHWLFLGCNFKETCSLSKKKKTRREELSEKRIREEYEKLGDISYPEMVT 378

  Fly   317 AIAFAFMIVLLITRKPGFVPGWSDLINRKVVGSASGLS-FIVLLIFALPTQYTFFKYCCGK---- 376
            |..|..|.||..||:|||||||.....:|...:.:.:| |:..|:|.:|.:    |.|.||    
Mouse   379 AFFFILMTVLWFTREPGFVPGWDSFFEKKGYRTDATVSVFLGFLLFLIPAK----KPCFGKKSDG 439

  Fly   377 -GPFTAQAIDAILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQ 440
             |...::.|:.|::|:...:.:||.::.|:|||:|||..|:.:||:..|...|..|..||...:.
Mouse   440 TGQEASKGIEPIITWKDFQKTMPWEIVILVGGGYALASGSKSSGLSTWIGHQMLSLSSLPPWAIT 504

  Fly   441 SITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIV 505
            .:..||.:..:.|.:|.....|.|||||.:|..|.::||...:|..:.||....|||..||||||
Mouse   505 LLACVLVSIVTEFVSNPATITIFLPILCTLSETLHINPLYTLVPVTMSISFAVMLPVGNPPNAIV 569

  Fly   506 TQYAHIKTKYFACCGIVPTIIGISVALVNTNTWGLIIFPESKSFPDWAK--EIKNQT 560
            ..|.|.:.|.....|:...:||:.:.:|..||||:.:| ...:||.|||  .|.:||
Mouse   570 FSYGHCQIKDMVKAGLGVNVIGLVIVMVAINTWGVSLF-HLDAFPAWAKVSNITDQT 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 166/566 (29%)
dass 52..532 CDD:273267 166/563 (29%)
Slc13a4NP_766480.1 ArsB_NhaD_permease 31..607 CDD:304373 173/583 (30%)
dass 40..602 CDD:273267 168/569 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836896
Domainoid 1 1.000 383 1.000 Domainoid score I822
eggNOG 1 0.900 - - E1_COG0471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 392 1.000 Inparanoid score I1967
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm8724
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.860

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