DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy-2 and nac-2

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001254976.1 Gene:nac-2 / 187898 WormBaseID:WBGene00003518 Length:585 Species:Caenorhabditis elegans


Alignment Length:591 Identity:176/591 - (29%)
Similarity:292/591 - (49%) Gaps:86/591 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EPGEQRKFVLGRCCIFHWRGKASIII--PLITLPILIYGFQTDMAEFKCLWLIVTMALLWITETL 65
            :|..||..:           |..:::  ||:.:|:|.:|     .|::||:.|:.::..||.|..
 Worm    36 KPSPQRTLI-----------KKLLVLLGPLVAVPLLFFG-----PEYRCLFSIIFLSTYWIGEAF 84

  Fly    66 PIYVTALFPLVFCPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGG 130
            ||.||:||||...|:|.:|.:..:...||.|:||:|:..||:|:.:|.:.||.||||:::..||.
 Worm    85 PIGVTSLFPLALYPILQIVPSKQISPVYFKDSIVLFMCTLIMAMAVEATGLHRRIALKLLTKVGA 149

  Fly   131 SPRRLFVGLMSVSTFMGLWISNSAGTAMMCPIVKALVNELDTNKIFPVYMTQEEEPVEEGEPPHP 195
            ....:.:|.|.:::|:..::|::|.||:|||...||:..:..    .|...:|:.  .:.:|| |
 Worm   150 KQPVMLLGFMCITSFISFFVSDTACTALMCPTAVALLMSMSD----AVQHLKEDH--RKPKPP-P 207

  Fly   196 SKITV------------------AFYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTSTVEI 242
            ...||                  |.....|:||.|||...:..||.|||||....:|:|...|.:
 Worm   208 DDATVAEKLRIDDMTPQDAGFCKALILACAHASLIGGTAIITSTGPNLVFRENIHKRYPEGQVTM 272

  Fly   243 TFANFMFYSIPLMVIVNVT--LVIIAFLI---THMGLFRPNSKTGKIIAEANTNRKLMEDVLRQR 302
            |:..:|.::||.|.:..:.  ::::.:.:   |....|...||     .||:. :||:|..::..
 Worm   273 TYLQWMVFAIPPMFVYLLASYIILVCYFMGPSTFARWFERPSK-----EEAHL-KKLIEKNIQTM 331

  Fly   303 HIDLGPMSCHEIQMAIAFAFMIVLLITRKPGFVPGWSDLINRK--VVGSASGLSFIVLLIFALPT 365
            :.|||.:|..|..:.:.|..:|...|:|.|||.|||.||:..:  :..|.||: .|..::|..| 
 Worm   332 YEDLGDVSWGEKSVFVFFILLIGSWISRDPGFTPGWGDLLPHRNFISDSVSGV-LISCILFVWP- 394

  Fly   366 QYTFFKYCCGKGPFTAQAID---AILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKA 427
                      |.||  ..||   .||.|..:.....|....|:|.|:|::....::||:.:||..
 Worm   395 ----------KDPF--DPIDPMAPILKWTDMKSKFSWSCTLLIGAGYAISEGVDKSGLSRLISCG 447

  Fly   428 MQ-VLIGLPNIVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILTLPACLGISM 491
            |: :.:|:.::.:|.....:....:.|.:||...:|.:||...::.::.:|||.|.||..:..|.
 Worm   448 MKNIFVGMSSLPLQLTVTTIIVIMTEFASNVSTGSIFIPISLGVAESMGVHPLYLALPTTVACSF 512

  Fly   492 VYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTIIGISVALVNTNTW-----GLIIFP------- 544
            .:.||:||||||:|.....|.......||.:..|..|.:..:|.|||     .|.|||       
 Worm   513 AFMLPISTPPNAVVYDTKVISMVEMIVCGFLLNIACILITSLNMNTWTYFIFSLNIFPENIVISS 577

  Fly   545 ESKSFP 550
            |:.|:|
 Worm   578 ENSSYP 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 154/511 (30%)
dass 52..532 CDD:273267 153/508 (30%)
nac-2NP_001254976.1 CitT 43..564 CDD:223547 166/563 (29%)
ArsB_NhaD_permease 72..552 CDD:304373 153/506 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159147
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

Return to query results.
Submit another query.