DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy-2 and nac-3

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001022673.1 Gene:nac-3 / 176429 WormBaseID:WBGene00003519 Length:566 Species:Caenorhabditis elegans


Alignment Length:547 Identity:158/547 - (28%)
Similarity:280/547 - (51%) Gaps:55/547 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LITLPILIYG--FQTDMAEFKCLWLIVTMALLWITETLPIYVTALFPLVFCPLLGLVNASIVCKQ 92
            ::.|..|.:|  ...:..|:||.:.:..:|:.|::|.:|:.|||:.|:|..||:|:::|:...|:
 Worm    56 VLVLTPLFFGQMLNWEGPEWKCAYCVCIIAVYWMSEVMPLAVTAMLPVVLFPLVGVLDANTTAKE 120

  Fly    93 YFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFVGLMSVSTFMGLWISNSAGTA 157
            |..||..:|:||||:|..:|..:||.|:||.|:|.||..|:.:.:|.|:|:..:..:|||:|.||
 Worm   121 YMNDTNFLFIGGLIMAAAVEKCDLHERVALSVLRCVGSEPKWIMLGFMTVTALLSSFISNTATTA 185

  Fly   158 MMCPIVKALVNELDTNKIFPVYMTQEEEPVEEGEPPHPS----------KITVAFYAGIAYASSI 212
            ||.||.:::|.:|       :...|.          ||:          |:.......|.:|::|
 Worm   186 MMVPIGQSVVQQL-------ISSFQH----------HPTNGERGRLGCKKMATGLVLSICFAANI 233

  Fly   213 GGLGTLIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSIPLMVIVNVTLVIIAFLITHMGLFRP 277
            ||.||..||.:|||..|..:..||.....:.:..::|::.|||::    .:.:|:: |.:..|  
 Worm   234 GGTGTATGTPSNLVMLGQLSALFPKVDGSLNYVTWIFFAYPLMLL----CLFVAWM-TLVSFF-- 291

  Fly   278 NSKTGKIIAEANTNRKLMEDVLRQRHIDLGPMSCHEIQMAIAFAFMIVLLITRKPGFVPGWSDLI 342
                   :.:|....:.:.::|:.|:.:|..|:..|..:.:.|..::.|.:.|.||.|||:....
 Worm   292 -------LRDAPEKDEAVTEMLKTRYNELPRMTYAEKSVFVCFCILLSLWVFRNPGVVPGFGVFF 349

  Fly   343 NRKVVGSASGLSFIVLLIFALPTQ----YTFFKYCCGKGPFTAQAIDAILSWEYVLRNIPWGLLF 403
            .:.....|:....:..|:|.||::    .|:.|    |.....:.  .::.|:.:....||.::.
 Worm   350 KKGAYTDATSAMIVAFLLFVLPSERPDLATYIK----KEDLKKRG--CLMDWKTMQETFPWSVVL 408

  Fly   404 LLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVANIVLPILC 468
            |||||||||...:|:||:::|..::..:..||..::|.:|.::|...:...:|.|.|:|.:||:.
 Worm   409 LLGGGFALAAGVKESGLSLLIGNSLSSIEHLPLWILQLLTMLIAMVITNICSNTVTASIFVPIVA 473

  Fly   469 EMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTIIGISVALV 533
            .::.....||..|.||..|..|..:..||.|||||||.....:|....|..|.:.::..:.:.::
 Worm   474 TLAQRAGHHPFTLMLPTTLASSFAFIFPVGTPPNAIVFGSGMVKVSDMAFVGGIISLELLVLTVL 538

  Fly   534 NTNTWGLIIFPESKSFPDWAKEIKNQT 560
            ..|:...:..| ...||.|| .|.|.|
 Worm   539 YMNSIAYLTLP-LLEFPTWA-IIANST 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 143/496 (29%)
dass 52..532 CDD:273267 143/493 (29%)
nac-3NP_001022673.1 SLC13_permease 83..543 CDD:238535 144/496 (29%)
dass 84..539 CDD:273267 143/491 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 316 1.000 Domainoid score I685
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I1442
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm4842
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.070

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