DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy-2 and slc13a5

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_004911787.1 Gene:slc13a5 / 100490590 XenbaseID:XB-GENE-983513 Length:603 Species:Xenopus tropicalis


Alignment Length:572 Identity:192/572 - (33%)
Similarity:296/572 - (51%) Gaps:52/572 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IIPLITLPILIYGFQTDMAEFKCLWLIVTMALLWITETLPIYVTALFPLVFCPLLGLVNASIVCK 91
            |.||:.||:.:.   ....|..|.:.|:.||:.|.||.:|:.||||.|::..|:.|::.:..||.
 Frog    35 ITPLLLLPLPLL---IKTKEASCAYCIILMAVYWCTEVIPLAVTALLPVLLFPMFGILESKKVCM 96

  Fly    92 QYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFVGLMSVSTFMGLWISNSAGT 156
            ||..||.::|:||||||:.:|:.|||.||||:|:.|||..|..|.:|.|.|:.|:.:||||:|.|
 Frog    97 QYLKDTNMLFVGGLIVAVAVEHWNLHKRIALKVLLIVGVRPALLMLGFMGVTAFLSMWISNTATT 161

  Fly   157 AMMCPIVKALVN-----------------------ELDTNKIFPVYMTQ-------EEEPVEEGE 191
            |||.|||:|:::                       ||:|....|:...|       .|.|.|..|
 Frog   162 AMMVPIVQAVLSQLNTAGEDPSMLESLEGQTNPALELETKNAIPLEPVQIVSNGHVAEIPEEAPE 226

  Fly   192 PPHPSKITVAFYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSIPLMV 256
            .....:|:......:.||:||||..||.|||.|||.:|.:|:.||.:...:.||::..::.|.|.
 Frog   227 KDERKRISKGMMLCVCYAASIGGTATLTGTGPNLVLKGQFTQIFPNNGDILNFASWFGFAFPNMA 291

  Fly   257 IVNVTLVIIAFLITHMGLFRPNSKTGKIIAEANTNRKLMEDVLRQRHIDLGPMSCHEIQMAIAFA 321
            ::   |.:..|.:....:.....||....|..:...:...:|:|:.:..|||:|..|..:...|.
 Frog   292 VM---LCMSWFWLQFSFIGFNFKKTWGCGATTSEKERAAYNVIREEYRKLGPISYAESSVLFLFI 353

  Fly   322 FMIVLLITRKPGFVPGWSDLI----NRKVVGSASGLSFIVLLIFALPTQYTFFKYCCGKGPFTAQ 382
            .:::|..||.||||.||:.::    |.:.|..|:...|:..|:|.||........|..:..|..:
 Frog   354 LLVLLWFTRDPGFVIGWATILFNKDNIEYVTDATVAVFVAFLLFILPASRPKISCCKARKSFDLE 418

  Fly   383 AID-----------AILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPN 436
            ..:           .:|:|:.|.:.:||.::.|||||||||..|..:||:..:.:.|..|..:|.
 Frog   419 EFEQAEEKDTFFSAPLLTWKVVHKQMPWSIVLLLGGGFALAKGSDASGLSHWLGQQMAPLHTIPP 483

  Fly   437 IVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPP 501
            ..:..|..::...|:...:||..|.:.||||..|:.::.::||.:.:|..|..|..:.|||:|||
 Frog   484 WAIAIILSLMIAVFTECASNVATATLFLPILASMTRSIGVNPLYIMIPCTLSTSFAFMLPVATPP 548

  Fly   502 NAIVTQYAHIKTKYFACCGIVPTIIGISVALVNTNTWGLIIFPESKSFPDWA 553
            ||||..|.|::.......|||..||||....:..||||..:| ...:||.||
 Frog   549 NAIVFSYGHLRVSDMVKTGIVMNIIGIICTTLAINTWGRPMF-SLDTFPQWA 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 176/527 (33%)
dass 52..532 CDD:273267 176/524 (34%)
slc13a5XP_004911787.1 ArsB_NhaD_permease 50..592 CDD:389757 183/545 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57284
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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