DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy-2 and slc13a1

DIOPT Version :9

Sequence 1:NP_001027201.1 Gene:Indy-2 / 3772456 FlyBaseID:FBgn0260466 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_002935016.2 Gene:slc13a1 / 100488100 XenbaseID:XB-GENE-487899 Length:621 Species:Xenopus tropicalis


Alignment Length:627 Identity:185/627 - (29%)
Similarity:298/627 - (47%) Gaps:104/627 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RCCIFHWRGKASIIIPLITLPILIYGFQTDMAEFKCLWLIVTMALLWITETLPIYVTALFPLVFC 78
            |.|:.       ::.||:.||:.:.   ....|.:|.:::..:|:.|::|.||:.|||..|.:..
 Frog    13 RLCLI-------VLTPLLLLPVPLI---LKSKETECAYVLFVVAIFWLSEALPLSVTAFLPALMF 67

  Fly    79 PLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFVGLMSVS 143
            ||.|::.:..|...||.|..::..|.:.:|..||..|||.|||||::.:||.:|..|.:|.|..:
 Frog    68 PLFGILPSKAVAATYFKDFHLLLTGVICLATSIEKWNLHKRIALRMVMLVGVNPGWLMLGFMFSA 132

  Fly   144 TFMGLWISNSAGTAMMCPIVKA----LVN---------------------ELD---------TNK 174
            .|:.:|:||::..||:.|||:|    ::|                     |||         :::
 Frog   133 GFLSMWLSNTSTAAMVMPIVEAVAQQIINAEAEVDAMQTGSTGGIDNEALELDEKNCESQPKSSE 197

  Fly   175 IFPV----------YMT------------------------QEEEPVEEGEPPHPSK----ITVA 201
            :.||          |.|                        :||:||...:..:..|    :..|
 Frog   198 LKPVNGYSNGCVTSYNTETKAAMEEYQEYQNEACSELKTELEEEQPVSSDKKRYRCKKDHMMCKA 262

  Fly   202 FYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSIPLMVIVNVTLVIIA 266
            ....|||:|:||||.|:.||.|||:|...:..|:|.|| :|.|..:....||:.||    |:|::
 Frog   263 MGLCIAYSSTIGGLTTITGTSTNLIFAEQFQSRYPGST-DINFGTWFILCIPIAVI----LMILS 322

  Fly   267 FLITH---MGL-FRPNSKTGKIIAEANTNRKLMEDVLRQRHIDLGPMSCHEIQMAIAFAFMIVLL 327
            ::...   .|. |:...|.||   |.....|....|::..:..|||:|..||...|.|..|.:|.
 Frog   323 WIWLQWLFFGFDFKEMFKCGK---ERTDREKASAKVIKDEYEKLGPLSYQEIITLILFILMALLW 384

  Fly   328 ITRKPGFVPGWSDLINRKVVGSASGLS---FIVLLIFALPTQYTFFKYCCG-KGPFTAQAIDAIL 388
            .||.|||:|||:.|. .|.:|.|:..:   .:.||.|.:|.    :.:..| |....:.:...::
 Frog   385 FTRDPGFIPGWATLF-PKYMGYATDSTAALLLGLLFFIIPA----YPWIRGTKDKSNSFSYVPLI 444

  Fly   389 SWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAF 453
            :|:.....:||.:..|:|||||||.....:||:..|:..|..|..||...|..|:.::....:..
 Frog   445 TWKEFQACMPWDICILVGGGFALAEGCEVSGLSQWIANKMTPLGSLPIWSVILISSLIVTTVTEV 509

  Fly   454 NANVVVANIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFAC 518
            .:|.....|.||||..::.|:.::||.:.:|..|..|..:.||||.||||||..|.|::......
 Frog   510 ASNPATITIFLPILAPLAEAINVNPLYILIPTTLCTSFAFLLPVSNPPNAIVFSYGHLQVMDMVK 574

  Fly   519 CGIVPTIIGISVALVNTNTWGLIIFPESKSFPDWAKEIKNQT 560
            .|:...|:|:.|.::..:||.:.:| ...::|.||..|...|
 Frog   575 AGLGINIMGVLVVMLAISTWAVPMF-NLDTYPSWAPIITAPT 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Indy-2NP_001027201.1 ArsB_NhaD_permease 50..533 CDD:304373 169/562 (30%)
dass 52..532 CDD:273267 169/559 (30%)
slc13a1XP_002935016.2 SLC13_permease 39..591 CDD:238535 169/564 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 357 1.000 Domainoid score I978
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2088
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm9386
Panther 1 1.100 - - O PTHR10283
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.150

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