DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2A:CG33829 and H2al2c

DIOPT Version :9

Sequence 1:NP_001027326.1 Gene:His2A:CG33829 / 3772447 FlyBaseID:FBgn0053829 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001171040.1 Gene:H2al2c / 547210 MGIID:3779546 Length:111 Species:Mus musculus


Alignment Length:106 Identity:39/106 - (36%)
Similarity:57/106 - (53%) Gaps:10/106 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 80
            :.|.||.|||||.|:.|.|.:|.|:.|:.:.|.|:|..|:|||...:|.|||.....:...||.|
Mouse    14 THSQRAELQFPVSRVDRFLGEGIYSRRLSSSALVFLVGVLEYLTPNILGLAGEVTHTSGMKRIAP 78

  Fly    81 RHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
            .|:...::|.|:|::|..     |||.     :|..|.:.|
Mouse    79 EHVCQVVQNKEQLHQLFK-----QGGT-----SVFEPPEPE 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33829NP_001027326.1 PTZ00017 16..124 CDD:185399 39/106 (37%)
H2al2cNP_001171040.1 H2A 12..99 CDD:305064 34/89 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.