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Protein Alignment His2A:CG33829 and Macroh2a2
DIOPT Version :9
Sequence 1: | NP_001027326.1 |
Gene: | His2A:CG33829 / 3772447 |
FlyBaseID: | FBgn0053829 |
Length: | 124 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001129279.1 |
Gene: | Macroh2a2 / 361844 |
RGDID: | 1561371 |
Length: | 372 |
Species: | Rattus norvegicus |
Alignment Length: | 123 |
Identity: | 81/123 - (65%) |
Similarity: | 92/123 - (74%) |
Gaps: | 2/123 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEL 65
|||| .||.|....|||.|||:.|||||:.|.|:||.:..|:..|||||:|||:||||||:|||
Rat 1 MSGR--SGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEILEL 63
Fly 66 AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
||||||||||.||.|||:.||:.||||||:||.|||||.|||||.|...||.||...|
Rat 64 AGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGTK 121
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
His2A:CG33829 | NP_001027326.1 |
PTZ00017 |
16..124 |
CDD:185399 |
74/108 (69%) |
Macroh2a2 | NP_001129279.1 |
H2A |
5..117 |
CDD:238029 |
74/111 (67%) |
Macro_H2A-like |
178..368 |
CDD:394875 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5262 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.900 |
|
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