DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adhr and Sdr9c7

DIOPT Version :9

Sequence 1:NP_001027272.1 Gene:Adhr / 3772432 FlyBaseID:FBgn0000056 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_081577.1 Gene:Sdr9c7 / 70061 MGIID:1917311 Length:313 Species:Mus musculus


Alignment Length:297 Identity:67/297 - (22%)
Similarity:115/297 - (38%) Gaps:86/297 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLTGKHVCYVADC-GGIALETSKVLMTKNIAKLAILQSTENPQAIAQLQSIKPSTQIFFWTYDVT 66
            :|:.|:| ::..| .|.....:|.|:.:.:..||...:.|..|.:.|    ..|.|:..:..|||
Mouse    22 NLSEKYV-FITGCDSGFGNLLAKQLVDRGMKVLAACLTEEGAQKLLQ----DTSHQLQTFLLDVT 81

  Fly    67 MAREDMKKYFDEVMVQM--DYIDVLINGA------------TLCDENNIDATINTNLTGMMNTVA 117
            .: |::|:....|..|:  ..:..|:|.|            |:.|...:   ||.||.|:::...
Mouse    82 KS-ENVKEAAQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTIKDFVKV---ININLVGLIDVTL 142

  Fly   118 TVLPYMDRKMGGTGGLIVNVTS------VIGLDPSPVFCAYSASKFGVIGFTRSLADPLYYSQNG 176
            .:||.:.:    ..|.:||::|      :.|       ..|..|||||..|:.|:...|::.  |
Mouse   143 NMLPMIKK----ARGRVVNMSSSGGRVAIFG-------GGYCVSKFGVEAFSDSIRRELHFF--G 194

  Fly   177 VAVMAVCCGPTRVFVDRELKAFLEYGQSFADRLRRAPCQSTSVCGQNIVNAIERSENGQIW---- 237
            |.|                 :.:|.|.           ..||:.||   .|:| |...::|    
Mouse   195 VKV-----------------SIIEPGN-----------YKTSILGQ---EALE-SRMKKLWDRLP 227

  Fly   238 --IADKGGLELVKLHWYWHMADQFVHYMQSNDEEDQD 272
              ..|..|.|     ::.....:.|:.|:|.:....|
Mouse   228 QETRDSYGEE-----YFQTYTKKLVNLMRSAEPRISD 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdhrNP_001027272.1 ADH_SDR_c_like 7..248 CDD:187584 62/267 (23%)
adh_short 7..195 CDD:278532 49/208 (24%)
Sdr9c7NP_081577.1 type2_17beta_HSD-like_SDR_c 26..302 CDD:187665 66/293 (23%)
adh_short 26..207 CDD:278532 51/230 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.