DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adhr and Rdh7

DIOPT Version :9

Sequence 1:NP_001027272.1 Gene:Adhr / 3772432 FlyBaseID:FBgn0000056 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001144221.1 Gene:Rdh7 / 54150 MGIID:1860517 Length:316 Species:Mus musculus


Alignment Length:166 Identity:44/166 - (26%)
Similarity:66/166 - (39%) Gaps:44/166 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LINGATLC-----------DENNIDATINTNLTGMMNTVATVLPYMDRKMGGTGGLIVNVTSVIG 142
            |:|.|.:|           |..||   ::.||.||:....::||.: ||   ..|.:||::|.:|
Mouse   109 LVNNAGICVFAINEWLKKEDFANI---LDVNLLGMIEVTLSMLPLV-RK---ARGRVVNISSSMG 166

  Fly   143 LDPSPVFC--AYSASKFGVIGFTRSLADPLYYSQNGVAVMAVCCGPTRVFVDR------------ 193
               ....|  .|..||:||..|:.||...:.|.  ||.|..:..|..|..|..            
Mouse   167 ---RVSLCGGGYCISKYGVEAFSDSLRREISYF--GVKVAIIEPGGFRTNVSNYERLSHSIEKLW 226

  Fly   194 -----ELKAFLEYGQSFADRLRRAPCQSTSVCGQNI 224
                 |:|..  |.::|.|...:|....|..|..::
Mouse   227 DQTSSEVKEV--YDKNFLDSYIKAIQSLTDTCSDDL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdhrNP_001027272.1 ADH_SDR_c_like 7..248 CDD:187584 44/166 (27%)
adh_short 7..195 CDD:278532 36/135 (27%)
Rdh7NP_001144221.1 type2_17beta_HSD-like_SDR_c 30..305 CDD:187665 44/166 (27%)
adh_short 30..217 CDD:278532 36/119 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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