DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adhr and Rdh5

DIOPT Version :9

Sequence 1:NP_001027272.1 Gene:Adhr / 3772432 FlyBaseID:FBgn0000056 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_008763278.1 Gene:Rdh5 / 366791 RGDID:1308849 Length:318 Species:Rattus norvegicus


Alignment Length:145 Identity:37/145 - (25%)
Similarity:57/145 - (39%) Gaps:39/145 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LINGATLC---------DENNIDATINTNLTGMMNTVATVLPYMDRKMGGTGGLIVNVTSVIGLD 144
            |:|.|.:.         .:::....:|.|..|.:.....:||.:.:    ..|.:||:|||:|. 
  Rat   108 LVNNAGVAGIIGPTPWLTQDDFQRVLNVNTLGPIGVTLALLPLLQQ----ARGRVVNITSVLGR- 167

  Fly   145 PSPVFCA----YSASKFGVIGFTRSLADPLYYSQNGVAVMAVCCGPTRVFV------DRELKAF- 198
                ..|    |..||||:..|:.||...:  :..||.|..|..|..|..|      :..|||. 
  Rat   168 ----IAANGGGYCVSKFGLEAFSDSLRRDM--APFGVQVSIVEPGFFRTPVTNLESLENTLKACW 226

  Fly   199 --------LEYGQSF 205
                    ..||::|
  Rat   227 ARLPPATQAHYGEAF 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdhrNP_001027272.1 ADH_SDR_c_like 7..248 CDD:187584 37/145 (26%)
adh_short 7..195 CDD:278532 31/124 (25%)
Rdh5XP_008763278.1 NADB_Rossmann 31..306 CDD:419666 37/145 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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