DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adhr and Rdh16

DIOPT Version :9

Sequence 1:NP_001027272.1 Gene:Adhr / 3772432 FlyBaseID:FBgn0000056 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_033066.1 Gene:Rdh16 / 19683 MGIID:1201375 Length:317 Species:Mus musculus


Alignment Length:149 Identity:43/149 - (28%)
Similarity:62/149 - (41%) Gaps:35/149 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 DEVMVQMDYIDVLINGATLCDENNIDATINTNLTGMMNTVATVLPYMDRKMGGTGGLIVNVTSVI 141
            :|.|.:.|:..||                :.||.||:....::||.: ||   ..|.:|||:||:
Mouse   122 NEWMKKQDFAHVL----------------DVNLLGMIEVTLSMLPLV-RK---ARGRVVNVSSVM 166

  Fly   142 GLDPSPVFCAYSASKFGVIGFTRSLADPLYY------------SQNGVAVMAVCCGPTRVFVDRE 194
            | ..|.....|..||:||..|:.||...|.|            ...||...|..|..|::..|:.
Mouse   167 G-RVSLFGGGYCISKYGVEAFSDSLRRELSYFGVKVAIIEPGFFLTGVTSSARLCSNTQMLWDQT 230

  Fly   195 LKAFLE-YGQSF-ADRLRR 211
            .....| ||:.: |..|:|
Mouse   231 SSEIREIYGEKYLASYLKR 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdhrNP_001027272.1 ADH_SDR_c_like 7..248 CDD:187584 43/149 (29%)
adh_short 7..195 CDD:278532 37/129 (29%)
Rdh16NP_033066.1 type2_17beta_HSD-like_SDR_c 30..306 CDD:187665 43/149 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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