DRSC/TRiP Functional Genomics Resources

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Protein Alignment primo-2 and CG14297

DIOPT Version :10

Sequence 1:NP_001027188.1 Gene:primo-2 / 3772427 FlyBaseID:FBgn0040076 Length:164 Species:Drosophila melanogaster
Sequence 2:NP_650756.1 Gene:CG14297 / 42260 FlyBaseID:FBgn0038655 Length:250 Species:Drosophila melanogaster


Alignment Length:152 Identity:50/152 - (32%)
Similarity:77/152 - (50%) Gaps:17/152 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLMVCVGNLCRSPIAEAVMRDLVARAGLQGEWHVESAGIEDWHSGHQPDERALNVLARHNIEYNG 74
            :|.||:||.|.||:||.:|::|:.:..|.  |.|:|||:..|::|.:|::|.|.:|..|.:..:.
  Fly     6 ILFVCMGNSCSSPMAEVIMQNLMVKTSLY--WEVDSAGLRTWNTGRRPNKRCLQILREHGLRSDH 68

  Fly    75 KARVLAPEDFLEFDYIFAMDLSNLAALRRMAP---KGTTAKLLILGNFG----------LKPDER 126
            ..|.....|||.|||:.|||.:....|...|.   .|...::|:|.:||          |.|..:
  Fly    69 FCRQFTVNDFLYFDYVVAMDEAVFKELLLWAADNRAGKHCQVLLLSSFGKNGLPAFIDSLSPTHK 133

  Fly   127 I--IEDPYYDIGEASFEEIYRQ 146
            :  ....||.|.|...:.|..|
  Fly   134 LKNFRSAYYQIKECCKQLILSQ 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
primo-2NP_001027188.1 LMWPTP 9..156 CDD:319971 50/152 (33%)
CG14297NP_650756.1 LMWPTP 4..152 CDD:319971 48/147 (33%)

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