DRSC/TRiP Functional Genomics Resources

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Protein Alignment primo-2 and LOC1270878

DIOPT Version :10

Sequence 1:NP_001027188.1 Gene:primo-2 / 3772427 FlyBaseID:FBgn0040076 Length:164 Species:Drosophila melanogaster
Sequence 2:XP_309631.5 Gene:LOC1270878 / 1270878 VectorBaseID:AGAMI1_005749 Length:161 Species:Anopheles gambiae


Alignment Length:160 Identity:74/160 - (46%)
Similarity:100/160 - (62%) Gaps:1/160 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SQKSSVLMVCVGNLCRSPIAEAVMRDLVARAGLQGEWHVESAGIEDWHSGHQPDERALNVLARHN 69
            |:|...|.:|:||:|||||||||....:..||:..:|.|:||.|..||.|..||.|||..:.:|:
Mosquito     2 SEKKKALFICLGNICRSPIAEAVFLKAIDTAGVADQWEVDSAAIGSWHVGRSPDHRALATMKKHD 66

  Fly    70 IEYNGKARVLAPEDFLEFDYIFAMDLSNLAALRRMAPKG-TTAKLLILGNFGLKPDERIIEDPYY 133
            :.|:.|||.:...||..:||||.||..|:|.|:..|||| :.||:|:||:|..:....||.||||
Mosquito    67 LPYSNKARQIKKADFEHYDYIFGMDGENIADLKERAPKGDSKAKILLLGDFDPQQPGAIIRDPYY 131

  Fly   134 DIGEASFEEIYRQCSIACRNFLKQARLKQI 163
            |.|...||:.|.||...|..||.:|:..:|
Mosquito   132 DSGSEGFEQCYVQCVRCCDAFLSKAQKGEI 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
primo-2NP_001027188.1 LMWPTP 9..156 CDD:319971 69/147 (47%)
LOC1270878XP_309631.5 LMWPTP 5..153 CDD:319971 68/147 (46%)

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