Protein Alignment primo-2 and LOC102549052

DIOPT Version :10

• Sequence 1: NP_001027188.1
• Gene: primo-2 / 3772427
• FlyBaseID: FBgn0040076
• Length: 164
• Species: Drosophila melanogaster
• Sequence 2: XP_038964873.1
• Gene: LOC102549052 / 102549052
• RGDID: 7727476
• Length: 273
• Species: Rattus norvegicus
• Alignment Length: 152
• Identity: 69/152 - (45%)
• Similarity: 94/152 - (61%)
• Gaps: 6/152 - (3%)

  Fly     9 SVLMVCVGNLCRSPIAEAVMRDLVARAGLQGEWHVESAGIEDWHSGHQPDERALNVLARHNIEYN 73
            |||.||:||:|||||||||.|.||....:...|.::|:.:.||:.|..||.||::.|..|.|...
  Rat   123 SVLFVCLGNICRSPIAEAVFRKLVTDENVSDNWAIDSSAVSDWNVGRPPDSRAVSCLRNHGISTA 187

  Fly    74 GKARVLAPEDFLEFDYIFAMDLSNLAALRRMA--PKGTTAKLLILGNFGLKPDER-IIEDPYYDI 135
            .|||.:..|||..||||..||.|||..|.|.:  .|...||:.:||::  .|.:: |||||||.
  Rat   188 HKARQITREDFATFDYILCMDESNLRDLNRKSNQVKNCKAKIELLGSY--DPQKQLIIEDPYYG- 249

  Fly   136 GEASFEEIYRQCSIACRNFLKQ 157
            .::.||.:|:||...|:.||::
  Rat   250 NDSDFEVVYQQCLRCCKAFLEK 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
primo-2	NP_001027188.1	LMWPTP	9..156	CDD:319971	68/149 (46%)
LOC102549052	XP_038964873.1	LMWPTP	122..270	CDD:319971	68/149 (46%)