DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33673 and tmbim1

DIOPT Version :9

Sequence 1:NP_001027218.2 Gene:CG33673 / 3772423 FlyBaseID:FBgn0053673 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001025668.1 Gene:tmbim1 / 595060 XenbaseID:XB-GENE-984286 Length:347 Species:Xenopus tropicalis


Alignment Length:222 Identity:63/222 - (28%)
Similarity:113/222 - (50%) Gaps:8/222 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FEDRYSRRIFISRVLMIVAINLLVTTLIMTFCVFHMGARKFLLKHWYIGLVGMGIILIFSFMICC 80
            ::|:..|..||.||..|:|:.||:|..|:....:......|:.:...:......:..:...::.|
 Frog   125 WDDKAVRHAFIRRVYAIIAVQLLLTVGIIAIFTYVEPVTSFIRRTPGVYYASYAVFFVTYIVLVC 189

  Fly    81 CSFLFRSSPCKYILLVIYVLAHSTVVCSAAVRYQPKLVFIAVASCAAIVVMLCLFARFAPCDFTG 145
            |....|..|...|||.|:.||.:.:..:.|..|..|.|.|::...|.:.:::.:|......|||.
 Frog   190 CEGPRRRFPWNIILLAIFTLAMAFMAGTIASFYSSKAVLISMGITAIVTIIVTIFCFQTKVDFTS 254

  Fly   146 CWIFVFVLSLVVLIMGIVAI------FFPTIRIVYASLGVLLFCVYIVIDVQMIIGGGTHKNEFD 204
            |.....||.:|:.:.|||..      :...:.::||:||.::|.:::..|.|::|  |..|:..:
 Frog   255 CAGLFAVLGIVMFVTGIVTAIVLAFKYVYWLHMLYAALGAIVFTLFLAFDTQLVI--GNRKHTIN 317

  Fly   205 ESDYVLAAMSLYSDIVFLFLYLLDLIG 231
            ..:||..|:.:|:|||::||.||.:||
 Frog   318 PEEYVYGALKIYTDIVYIFLNLLQIIG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33673NP_001027218.2 LFG_like 16..231 CDD:198410 61/220 (28%)
tmbim1NP_001025668.1 LFG_like 124..344 CDD:198410 61/220 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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