DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33673 and tmbim4

DIOPT Version :9

Sequence 1:NP_001027218.2 Gene:CG33673 / 3772423 FlyBaseID:FBgn0053673 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001004879.1 Gene:tmbim4 / 448209 XenbaseID:XB-GENE-947555 Length:235 Species:Xenopus tropicalis


Alignment Length:230 Identity:60/230 - (26%)
Similarity:103/230 - (44%) Gaps:41/230 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RRIFISRVLMIVAINLLVTTLIMTFCVFHMGARKF------LLKHWYIGLVGMGIILIFSFMICC 80
            |..|:.:|..|:...:|:|||.....::....:.|      ||....||.:|..|.|.       
 Frog    28 RMDFLKKVYSILTTQILLTTLTAALFLYSKSIQTFVHESPALLLISVIGSLGTVIALT------- 85

  Fly    81 CSFLFRSS-PCKYILLVIYVLAHSTVVCSAAVRYQPKLVFIAVASCAAIVVMLCL--------FA 136
               ::|.. |....||:.:....:..|.:|...|...:|..|.....|:.:.|..        |:
 Frog    86 ---IYRQQHPVNLYLLLAFTAFEAVTVATAVTFYDVAVVLQAFILTTAVFLGLTAFTFQSKRDFS 147

  Fly   137 RFAPCDFTGCWIFVFVLSLVVLIMGIVAIFF--PTIRIVYASLGVLLFCVYIVIDVQMIIGGGTH 199
            :|....|||.||.:|.        ..:.:||  .|:.::.|:.|.||||.:|:.|..:::    |
 Frog   148 KFGAGLFTGLWILIFA--------SFLRLFFYSETVELLIAAAGALLFCGFIIFDTHLLM----H 200

  Fly   200 KNEFDESDYVLAAMSLYSDIVFLFLYLLDLIGLID 234
            |  ....:|:||:::||.||:.|||:||.::..::
 Frog   201 K--LSPEEYILASVNLYLDIINLFLHLLRILQAVN 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33673NP_001027218.2 LFG_like 16..231 CDD:198410 60/225 (27%)
tmbim4NP_001004879.1 GAAP_like 2..233 CDD:198411 60/228 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2042
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

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