DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33673 and grinab

DIOPT Version :9

Sequence 1:NP_001027218.2 Gene:CG33673 / 3772423 FlyBaseID:FBgn0053673 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001295540.1 Gene:grinab / 394183 ZFINID:ZDB-GENE-040426-1367 Length:337 Species:Danio rerio


Alignment Length:231 Identity:64/231 - (27%)
Similarity:123/231 - (53%) Gaps:15/231 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PMYFEDRYS---------RRIFISRVLMIVAINLLVTTLIMTFCVFHMGARKFLLKHWYIGLVGM 68
            |.|..|:::         ||:||.:|..::::.|.:||..:....|....:.|::::.:...||.
Zfish   106 PEYDSDQFTSSGLDNKEIRRVFIRKVFSVLSLQLAITTAFVAIFTFEPHVKLFVMQNSWTYWVGY 170

  Fly    69 GIILIFSFMICCCSFLFRSSPCKYILLVIYVLAHSTVVCSAAVRYQPKLVFIAVASCAAIVVMLC 133
            .:.|:..|:|.||....|..|...|.|.:..||.|.:|...:..|...:|.:|:.....:...:.
Zfish   171 LVFLVPYFVILCCGEFRRKHPWNLICLSVLTLAMSYMVGVISSFYDTDIVIMAIGITVVVCFTVI 235

  Fly   134 LFARFAPCDFTGCWIFVFVLSLVVLIMGIVAIFF--PTIRIVYASLGVLLFCVYIVIDVQMIIGG 196
            :|:.....|||.|:..:||..:|:.:.||:.|.|  ..:.::|::||.|||..::.:|.|:::| 
Zfish   236 IFSMQTKYDFTSCYGVLFVCGIVLFVFGILCIIFYSKIMDLIYSTLGALLFTCFLAVDTQLLLG- 299

  Fly   197 GTHKN-EFDESDYVLAAMSLYSDIVFLFLYLLDLIG 231
              :|| .....:|:.|:::||.||:.:||::|.::|
Zfish   300 --NKNLSLSPEEYIFASLNLYLDIIQIFLFILRILG 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33673NP_001027218.2 LFG_like 16..231 CDD:198410 61/226 (27%)
grinabNP_001295540.1 LFG_like 119..333 CDD:198410 60/216 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574766
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0670
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.760

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