DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33673 and Nmda1

DIOPT Version :9

Sequence 1:NP_001027218.2 Gene:CG33673 / 3772423 FlyBaseID:FBgn0053673 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_523722.1 Gene:Nmda1 / 36419 FlyBaseID:FBgn0013305 Length:324 Species:Drosophila melanogaster


Alignment Length:230 Identity:82/230 - (35%)
Similarity:131/230 - (56%) Gaps:5/230 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EREP--MYFEDRYSRRIFISRVLMIVAINLLVTTLIMTFCVFHMGARKFLLKHWYIGLVGMGIIL 72
            |.:|  ..|:|:..||.||.:|.:|:...|:||...:...|:|.|.:.|...:.::..|.:|::|
  Fly    96 ESQPKNFSFDDQSIRRGFIRKVYLILMGQLIVTFGAVALFVYHEGTKTFARNNMWLFWVALGVML 160

  Fly    73 IFSFMICCCSFLFRSSPCKYILLVIYVLAHSTVVCSAAVRYQPKLVFIAVASCAAIVVMLCLFAR 137
            :....:.||..:.|.:|..:|.|.::..|.|.::..:|.:|.||.|.:||...||:.:.|.:||.
  Fly   161 VTMLSMACCESVRRQTPTNFIFLGLFTAAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIFAL 225

  Fly   138 FAPCDFTGCWIFVFVLSLVVLIMGIVAIFF--PTIRIVYASLGVLLFCVYIVIDVQMIIGGGTHK 200
            ....|||.....:....:|.||.||||||.  ..|.:||||:|.|||.||::.|.|::: ||.||
  Fly   226 QTKYDFTMMGGILIACMVVFLIFGIVAIFVKGKIITLVYASIGALLFSVYLIYDTQLMM-GGEHK 289

  Fly   201 NEFDESDYVLAAMSLYSDIVFLFLYLLDLIGLIDD 235
            ......:|:.||::||.||:.:|:|:|.:||...|
  Fly   290 YSISPEEYIFAALNLYLDIINIFMYILTIIGASRD 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33673NP_001027218.2 LFG_like 16..231 CDD:198410 77/216 (36%)
Nmda1NP_523722.1 LFG_like 103..320 CDD:198410 77/217 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439706
Domainoid 1 1.000 62 1.000 Domainoid score I575
eggNOG 1 0.900 - - E1_COG0670
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I411
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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