DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33673 and tmbi-4

DIOPT Version :9

Sequence 1:NP_001027218.2 Gene:CG33673 / 3772423 FlyBaseID:FBgn0053673 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_509543.2 Gene:tmbi-4 / 181150 WormBaseID:WBGene00006479 Length:276 Species:Caenorhabditis elegans


Alignment Length:218 Identity:63/218 - (28%)
Similarity:97/218 - (44%) Gaps:17/218 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DRYSRRIFISRVLMIVAINLLVTTLIMTFCVFHMGARKFLLKH-WYI--GLVGMGIILIFSFMIC 79
            :|..|..|:.:||.||...||.|..|.........:.:.|.|| |.:  .|:| .|.||.:..:.
 Worm    66 NRMIRIAFLRKVLGIVGFQLLFTIGICAAIYNIPNSNQLLQKHAWIVFPNLLG-SIALIIALHVY 129

  Fly    80 CCSFLFRSSPCKYILLVIYVLAHSTVVCSAAVRYQPKLVFIAVASCAAIVVMLCLFARFAPCDFT 144
            .     |..|..|:||..:....:..:......::.|:|..|......:|..|..:......||:
 Worm   130 A-----REVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTLQNKRDFS 189

  Fly   145 GCWIFVFVLSLVVLIMGIVAIFF--PTIRIVYASLGVLLFCVYIVIDVQMIIGGGTHKNEFDESD 207
            ..:..:..|..|:|..||..:||  |.:..|....|..||||.:|||:.||:      ..|...|
 Worm   190 VGYASMGSLLCVLLWAGIFQMFFMSPAVNFVINVFGAGLFCVLLVIDLDMIM------YRFSPED 248

  Fly   208 YVLAAMSLYSDIVFLFLYLLDLI 230
            |:.|.:|||.||:.||:.:|.::
 Worm   249 YICACVSLYMDILNLFIRILQIV 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33673NP_001027218.2 LFG_like 16..231 CDD:198410 63/218 (29%)
tmbi-4NP_509543.2 GAAP_like 43..275 CDD:198411 63/218 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0670
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2042
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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