DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4970 and Ccdc96

DIOPT Version :10

Sequence 1:NP_001027253.1 Gene:CG4970 / 3772412 FlyBaseID:FBgn0032364 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_080001.1 Gene:Ccdc96 / 66717 MGIID:1913967 Length:584 Species:Mus musculus


Alignment Length:671 Identity:125/671 - (18%)
Similarity:225/671 - (33%) Gaps:206/671 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PIPIPSSQRGMPKQNVRRSVVSISSLPSKKSSSAVKRKLSYIEEQPFHLYKLRKLEASAETQLKI 144
            |.|.|...:|...::..:.|   |.....|.|..:......:.|.|          .:|||..:.
Mouse    44 PKPEPEPTQGREPESETQPV---SDSSKAKDSEGIDYAHVEVPESP----------GAAETAGEA 95

  Fly   145 VHSHPHLTSSTDSVEEATNQSDGDKMDSELGNTTDHEDQMSVSSDSNIRMRFDILQTLRNIPDWD 209
            |...|.....|....:..::...||.:.|..:..:.||:   ..|.:              .|.|
Mouse    96 VSREPESLPQTQPKTKPESKEPEDKDEDEDEDEDEDEDE---DEDED--------------EDED 143

  Fly   210 ELSDIGTTDHNLGIDKKS----------------VEMQQVPGSELEQLQIQLARKSL-------- 250
            |..:....:...|..|:.                ||....||.:..:   :.||:||        
Mouse   144 EGEERDRPEKPKGKGKREKRKESRFRPSLPLTTIVEEGAAPGPQAAK---EKARESLKKRDSEEI 205

  Fly   251 --------SSSMESLIPSESNYEAPSSQNDDDVHGTEIPSPSGLESVDESDW-----RLQGMQFK 302
                    .|:.|.|.|.|:..|.....                .|.:|.:|     :||..|.:
Mouse   206 EGTDRERHKSTEEQLHPGEAKEEEKQKG----------------ASTEEFEWTADMQKLQEQQLR 254

  Fly   303 SSHVATFKDITSESRSSTSSLNSIPTTFSIGQMVQSYLDGLIEKVVDIFVNTDYLRSKNLDKSKL 367
                                          |::|:.|...|:|:                     
Mouse   255 ------------------------------GELVEQYHSLLVER--------------------- 268

  Fly   368 MNRLFKEVEDHHWVSHDNNLLTKRLTEHHLRRFKYSLVTPSSRSYINESQRS-----RYLGALNE 427
             ||          ....|..|.:::.|...::...:...|..:|...||...     |||..|.|
Mouse   269 -NR----------YQRYNMYLQQKIHETLRKKGLEAAAEPGDKSAEPESPEKEQAYLRYLAMLEE 322

  Fly   428 LDHWLNRTRQAEQMHLAEKERLLSELERMQREDNEKIE---RLEEIFRSTLLRDSQPSERLRFVT 489
            |     :.::|:.:....:|  :.||::..:|...::|   |..:..:..::.....|.|.|...
Mouse   323 L-----KKQEADDLEWYRQE--VRELKQQCQEKQTRVEKEWRRFQALKKQVVMQVMGSCRTRGGR 380

  Fly   490 ETALK---QMRA----KRDALSATRLILIIRQHDNSYIKKKVDEIEAISGEVKLETYLSADNDVQ 547
            :.||:   |::|    |...:||.||       :|..:|:.:         |..||.:.|..|:.
Mouse   381 QAALREVEQLQALEDKKEKEMSAVRL-------ENVQLKQSL---------VHFETRMKAQEDLA 429

  Fly   548 QMV------------TTLNNK----NAELERMCTLVKTKIHTISHLRCRRKLLNRKFREAKDELR 596
            :.:            .|.|.|    |.||.::.|.|.:.:..|:|::.:...::.:....|.:|.
Mouse   430 EGLLLIDFEQLKIENQTFNEKVEERNEELLKLRTKVTSNVQIITHVKEKLSFIDTENSCKKAQLS 494

  Fly   597 ERQKRQIAL-RDEVYNCNLTHNKL-LDQIKEVRREGGIMCYPKLLADFDRTEKFIAIKQASIVEL 659
            | ...|:|| ||.:.......:.| :|.:| :.::.|::....||.|.:...:...:....:..|
Mouse   495 E-VDAQVALGRDLLTKTKQARDSLRIDNVK-LSQKCGLLGKESLLRDLEEKVEKTEMLNRRLESL 557

  Fly   660 KTQHDNLLKRIEKIELKILES 680
            |..|..|....:.::.||.|:
Mouse   558 KRHHAGLALSCKGVKQKIREA 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4970NP_001027253.1 DUF4201 496..672 CDD:464008 42/197 (21%)
Ccdc96NP_080001.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..243 44/247 (18%)
Smc <210..>583 CDD:440809 90/472 (19%)
DUF4201 394..570 CDD:464008 41/193 (21%)

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