DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33864 and hp1bp3

DIOPT Version :10

Sequence 1:NP_001027384.1 Gene:His1:CG33864 / 3772409 FlyBaseID:FBgn0053864 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001186654.1 Gene:hp1bp3 / 558102 ZFINID:ZDB-GENE-060810-79 Length:549 Species:Danio rerio


Alignment Length:348 Identity:85/348 - (24%)
Similarity:129/348 - (37%) Gaps:119/348 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VEKKVV-QKKASGSAGT----KAKKASATPSHPPTQQMVDA---SIKNLKERGGSSLLAIKKYIT 76
            |||.|| |.|..|.:|:    |..|.|...|..|.:.:.::   .|..|.|...:|.:.||||:.
Zfish   190 VEKGVVRQLKGKGFSGSFTIGKVSKYSPAASALPKETLGESLPLIITRLCEPKEASYILIKKYLE 254

  Fly    77 ATY-KCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKK----------------- 123
            ..: :.:.:.....:|..|:.:|..|.|.|..||||||:|:|..:..|                 
Zfish   255 QHFPQLNVENRPDILKNCLQRSVEKGYLEQITGKGASGTFQLKKAGNKVLMGGGLLEDAVVAAIT 319

  Fly   124 -EKDPKA------------------------------KSKVL----------------------- 134
             ..:||.                              |.||:                       
Zfish   320 AMNEPKTCSITILRKFLMQRKEKNAFPVVSHLKRTLQKCKVMGWMEQISGHGLSGSYQLSYPFYP 384

  Fly   135 -------SAEKKVQSKKVASKKIGVS------SKKTAVGAADKK---PKAKKAVATKKTA----E 179
                   ...:|::.|:|..|::.||      |::.:...:|::   ||.:...|.::.|    :
Zfish   385 SPAVLFPEMVEKLKEKEVKRKRVEVSDESEEESEEESEEESDEEEPPPKKRNQRANQRPAPKARQ 449

  Fly   180 NKKTEKAKAKDAKKTGIIKSKPAATKAKVTAAKPKAVVAKASKAKP-----------AVSAKPKK 233
            ||:.:....|.|.|      |||..||...|.||.|....|||..|           |.::|||.
Zfish   450 NKRAKPVSRKPAPK------KPAPRKAPPPAKKPAAASKAASKKAPEPVKATPVKKAAPTSKPKT 508

  Fly   234 TVKKASVSATAKKPKAKTTAAKK 256
            .:.|...|..:|:|..|  ||||
Zfish   509 PIAKKMTSRGSKRPSPK--AAKK 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33864NP_001027384.1 H15 43..130 CDD:238028 27/138 (20%)
hp1bp3NP_001186654.1 LGT <7..87 CDD:469786
Linker_histone 136..207 CDD:459846 9/16 (56%)
Linker_histone 235..294 CDD:459846 20/58 (34%)
Linker_histone 311..376 CDD:459846 5/64 (8%)
Blue background indicates that the domain is not in the aligned region.

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