DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33864 and H1f8

DIOPT Version :10

Sequence 1:NP_001027384.1 Gene:His1:CG33864 / 3772409 FlyBaseID:FBgn0053864 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001102821.1 Gene:H1f8 / 502875 RGDID:1566236 Length:332 Species:Rattus norvegicus


Alignment Length:301 Identity:86/301 - (28%)
Similarity:128/301 - (42%) Gaps:70/301 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDSAVATSASPVA---APPATVEKKVVQKKASGSAGTKAKKASATPS---------HPPTQQMVD 54
            |.|:|::|:|..:   :||             ||.|... ..|..||         :|...:||.
  Rat     5 SVSSVSSSSSVPSSDTSPP-------------GSCGLPG-AVSPDPSCSRIQVGQRNPTMLRMVL 55

  Fly    55 ASIKNLKERGGSSLLAIKKYITATY-KCDAQKLAPFIKKYLKSAVVNGKLIQ---TKGKGASGSF 115
            .::|..::|.|:|::|||.||...| .....:....:|:.|::.:..|.|.:   :|.|||:|||
  Rat    56 EALKAREKRQGTSVVAIKVYIQHKYPTVGTTRFKYLLKQALETGMRRGLLTRPANSKAKGATGSF 120

  Fly   116 KLSASAKKEKD--PKAK----------SKVLSAEKKVQSKKVASKKI----GVSSKKTAVGAA-- 162
            ||....||::.  |||:          ||.....||.|..|..::|.    |...|.....||  
  Rat   121 KLVPKPKKKRTCAPKARGGATGTKETGSKESGLRKKDQVGKAKTEKAAPNPGRKRKAYPCSAATL 185

  Fly   163 DKKPKAKKAVATKKTAENKKTEKA-----------KAK------DAKKTGIIKSKPAATKAKVTA 210
            :|.||..|||..:......|.:||           |.|      :|...|  |:|....|:|.:|
  Rat   186 EKAPKNAKAVPREVREAPLKRDKAAGAPLTANIGQKVKHSGTGQEADAHG--KTKDVCEKSKASA 248

  Fly   211 AKPKAVVAKASKAKPAVSAKPKKTVKKASVSATAKKPKAKT 251
            :|.:..||...|.:.|..|..:..|:.|.   |.:|.||.|
  Rat   249 SKVQNSVASLIKKEMAAIAHMETVVQGAK---TVQKTKAPT 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33864NP_001027384.1 H15 43..130 CDD:238028 32/101 (32%)
H1f8NP_001102821.1 H15 44..135 CDD:238028 28/90 (31%)
PTZ00121 <127..>329 CDD:173412 47/165 (28%)

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