DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and PDR18

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_014468.3 Gene:PDR18 / 855807 SGDID:S000005353 Length:1333 Species:Saccharomyces cerevisiae


Alignment Length:689 Identity:148/689 - (21%)
Similarity:262/689 - (38%) Gaps:210/689 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRL 83
            ||.:::.:|             ....:.::|...||:...|.|.|::|.|||||||||..::||.
Yeast   731 WKNVSFTIP-------------HSSGQRKLLDSVSGYCVPGTLTALIGESGAGKTTLLNTLAQRN 782

  Fly    84 RGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVA 148
            .|.:|||::::|:.|:. ...|.:.::.|.:::|...|..|.|.|.:..:..:....|||.:.|.
Yeast   783 VGTITGDMLVDGLPMDA-SFKRRTGYVQQQDLHVAELTVKESLQFSARMRRPQSIPDAEKMEYVE 846

  Fly   149 DLLLAVGLRDAAHTRIQQLSGG----ERKRLSLAEELITDP-IFLFCDEPTTGLDSFSAYSVIKT 208
            .::..:.:::.:...:.::..|    :||:||:..||:..| :.||.||||:||||.||::|:|.
Yeast   847 KIISILEMQEFSEALVGEIGYGLNVEQRKKLSIGVELVGKPDLLLFLDEPTSGLDSQSAWAVVKM 911

  Fly   209 LRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGV 273
            |:.|..                     :|:|                                  
Yeast   912 LKRLAL---------------------AGQS---------------------------------- 921

  Fly   274 LSNSPNGTHKKAAICSIHQPTSDIFELFTHIILM-DGGRIVYQG----RTEQAAKFFTDLG-YEL 332
                        .:|:||||::.:||.|..::|: .||:.:|.|    .:....|:|...| .:.
Yeast   922 ------------ILCTIHQPSATLFEQFDRLLLLGKGGQTIYFGEIGKNSSSVIKYFEKNGARKC 974

  Fly   333 PLNCNPADFYLKTLADKEGKENAGAVLRAKYEHETDGLYSGSWLLARSYS------GDYLKHVQN 391
            ..|.|||::.|:.:       .|||....:..      :...|..:..|:      .|.:|.:.:
Yeast   975 QQNENPAEYILEAI-------GAGATASVQQN------WPDIWQKSHEYANINEKINDMIKDLSS 1026

  Fly   392 FK-----------KIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQ 445
            ..           ...:.||.:.::.|......||:.         .|.|..:.||.||:  ...
Yeast  1027 TTLHKTATRASKYATSYSYQFHHVLKRSSLTFWRNLN---------YIMAKMMLLMISGL--FIG 1080

  Fly   446 RTVQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRR--------EVGEGTYSLSAYYVALV-- 500
            .|...||.:...|.|.:...| ..:....||...|..|        ||.|...::..:.:.|:  
Yeast  1081 FTFFHVGVNAIGLQNSLFACF-MAIVISAPATNQIQERATVAKELYEVRESKSNMFHWSLLLITH 1144

  Fly   501 -LSFVPVAFFKGYVFLSVIYASIYY--------TRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLF 556
             |:.:|...    :|.::.:.|.|:        :|..:.||:...|..|..:     |:.|..|:
Yeast  1145 YLNELPYHL----LFSTIFFVSSYFPLGVFTEASRSSVFYLNYAILFQLYYI-----GLALMILY 1200

  Fly   557 ESDKMAS-ECAAPFDLIFLI-FGGTYMNVDTVPGLKYLSLFFYSNEALMYKFWIDIDNIDCPVNE 619
            .|..:.| .....|.|.||: |.|.......:||                 ||..:         
Yeast  1201 MSPNLQSANVIVGFILSFLLSFCGAVQPASLMPG-----------------FWTFM--------- 1239

  Fly   620 DHPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFH 658
                            ::.:.|||:|.    .:|.::.|
Yeast  1240 ----------------WKLSPYTYFLQ----NLVGLLMH 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 73/290 (25%)
3a01204 40..673 CDD:273361 145/668 (22%)
ABC2_membrane 404..604 CDD:279410 46/220 (21%)
PDR18NP_014468.3 3a01205 1..1333 CDD:273362 148/689 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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