DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and SNQ2

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_010294.1 Gene:SNQ2 / 851574 SGDID:S000002418 Length:1501 Species:Saccharomyces cerevisiae


Alignment Length:758 Identity:166/758 - (21%)
Similarity:286/758 - (37%) Gaps:241/758 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRL 83
            ||.:.:.:|.:           ..||.|  |.:.||:...|.:.|::|.|||||||||..::||.
Yeast   855 WKDVCFTIPYE-----------GGKRML--LDNVSGYCIPGTMTALMGESGAGKTTLLNTLAQRN 906

  Fly    84 RGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVA 148
            .|.:|||:::||..::. ...|.:.::.|.:|::...|..|.|.|.:..:..:....:||...|.
Yeast   907 VGIITGDMLVNGRPIDA-SFERRTGYVQQQDIHIAELTVRESLQFSARMRRPQHLPDSEKMDYVE 970

  Fly   149 DLLLAVGLRDAAHTRIQQLSGG----ERKRLSLAEELITDP-IFLFCDEPTTGLDSFSAYSVIKT 208
            .::..:|:.:.|...:.::..|    :||:||:..||:..| :.||.||||:||||.|::::|:.
Yeast   971 KIIRVLGMEEYAEALVGEVGCGLNVEQRKKLSIGVELVAKPDLLLFLDEPTSGLDSQSSWAIIQL 1035

  Fly   209 LRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGV 273
            ||.|                     :.:|:|                                  
Yeast  1036 LRKL---------------------SKAGQS---------------------------------- 1045

  Fly   274 LSNSPNGTHKKAAICSIHQPTSDIFELFTHIILM-DGGRIVYQG----RTEQAAKFFTDLGYELP 333
                        .:|:||||::.:||.|..::|: .||:.||.|    .:.....:|...|..  
Yeast  1046 ------------ILCTIHQPSATLFEEFDRLLLLRKGGQTVYFGDIGKNSATILNYFERNGAR-- 1096

  Fly   334 LNC----NPADFYLKTLADKEGKENAGAVLRAKYE-HETDGLYSGSWLLARSYSGDYLKHVQNFK 393
             .|    |||::.|:.:       .|||....|.: ||       .||       :.::..|..:
Yeast  1097 -KCDSSENPAEYILEAI-------GAGATASVKEDWHE-------KWL-------NSVEFEQTKE 1139

  Fly   394 KIR-------------------------WIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTL 433
            |::                         :.||...:::|..|...|::.        ::::.:.|
Yeast  1140 KVQDLINDLSKQETKSEVGDKPSKYATSYAYQFRYVLIRTSTSFWRSLN--------YIMSKMML 1196

  Fly   434 SLMYSGIGGL-TQRTVQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRR--------EVGEGT 489
            .|    :||| ...|..:||.|...|.|.|...| ..:....||...|..|        ||.|..
Yeast  1197 ML----VGGLYIGFTFFNVGKSYVGLQNAMFAAF-ISIILSAPAMNQIQGRAIASRELFEVRESQ 1256

  Fly   490 YSLSAYYVALV---LSFVPVAFFKGYVFLSVIYASIYYTRGFLLYLSMGFLMSLSAVAAVGY--- 548
            .::..:.:.|:   ||.:|...|    |.::.:.|.|:.      |.:.|..|.|||..:.|   
Yeast  1257 SNMFHWSLVLITQYLSELPYHLF----FSTIFFVSSYFP------LRIFFEASRSAVYFLNYCIM 1311

  Fly   549 ------GVFLSSLFESDKMASE------CAAPFDLIFLIFGGTYMNVDTVPGL------------ 589
                  |:.|..|:.|..:.|.      |.:    ..|.|.|....|..:||.            
Yeast  1312 FQLYYVGLGLMILYMSPNLPSANVILGLCLS----FMLSFCGVTQPVSLMPGFWTFMWKASPYTY 1372

  Fly   590 -------------------KYLSLFFYSN--------EALMYKFWIDIDNIDCPVNEDHPCIKTG 627
                               |.|:.|...|        :..:.|....|:|.|...:..:...:.|
Yeast  1373 FVQNLVGIMLHKKPVVCKKKELNYFNPPNGSTCGEYMKPFLEKATGYIENPDATSDCAYCIYEVG 1437

  Fly   628 VEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSFGLVRRYIH 670
            ...|   ::.::.|:|....|.:..:.:.|:|::...|....|
Yeast  1438 DNYL---THISSKYSYLWRNFGIFWIYIFFNIIAMVCVYYLFH 1477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 76/290 (26%)
3a01204 40..673 CDD:273361 163/737 (22%)
ABC2_membrane 404..604 CDD:279410 54/265 (20%)
SNQ2NP_010294.1 3a01205 103..1480 CDD:273362 166/758 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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