DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG10

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_175734.1 Gene:ABCG10 / 841761 AraportID:AT1G53270 Length:590 Species:Arabidopsis thaliana


Alignment Length:643 Identity:162/643 - (25%)
Similarity:256/643 - (39%) Gaps:164/643 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGPSLC--LEWKQLNYYVPDQEQSNYSFWNEC---RKKRELRILQDASGHMKTGDLIAILGGSGA 70
            ||..:.  ||.|.|:|.:..   :...|.|.|   .:|.|..||:|.|...::.::.||.|.|||
plant    11 GGREISYRLETKNLSYRIGG---NTPKFSNLCGLLSEKEEKVILKDVSCDARSAEITAIAGPSGA 72

  Fly    71 GKTTLLAAISQRL-RGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKM 134
            ||||||..::.:: .|.::|.|::||..|:..:..|:|.|:||.:......|..|.|.:.:..::
plant    73 GKTTLLEILAGKVSHGKVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSALLRL 137

  Fly   135 HRRTTKAEKRQRVADLLLAVGLRDAAHTRIQQ-----LSGGERKRLSLAEELITDPIFLFCDEPT 194
              :|.:.:...:|..|:..:||...|.:||.|     :|||||:|:|:..||:.||..:..||||
plant   138 --KTKRKDAAAKVKRLIQELGLEHVADSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPT 200

  Fly   195 TGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHE 259
            :||||.||..|:..|:.:..::                                           
plant   201 SGLDSASALQVVTLLKDMTIKQ------------------------------------------- 222

  Fly   260 SLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRT---EQA 321
                                   .|..:.:||||...|.|....|:|:..|.:|..|..   .|.
plant   223 -----------------------GKTIVLTIHQPGFRILEQIDRIVLLSNGMVVQNGSVYSLHQK 264

  Fly   322 AKFFTDLGYELPLNCNPADF------YLKTLADKEGKE---------------NAGAVLRAKYEH 365
            .||   .|:::|...|..::      .|:.:..:..:|               :||..|     |
plant   265 IKF---SGHQIPRRVNVLEYAIDIAGSLEPIRTQSCREISCYGHSKTWKSCYISAGGEL-----H 321

  Fly   366 ETDGLYSGSWLLARSYSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITA 430
            ::|           |:|...|:.||...: |....::.....|.|..|:...:|||         
plant   322 QSD-----------SHSNSVLEEVQILGQ-RSCKNIFRTKQLFTTRALQASIAGLI--------- 365

  Fly   431 VTLSLMYSGIGGLTQRT-VQDVGGSIFMLSNEMIFTFSYGVTY----IFPAALPIIRREVGEGTY 490
              |..:|..:|...:.. |...|...|:|      ||....|.    ||.....|:.||.....|
plant   366 --LGSIYLNVGNQKKEAKVLRTGFFAFIL------TFLLSSTTEGLPIFLQDRRILMRETSRRAY 422

  Fly   491 SLSAYYVALVLSFVPVAFFKGYVFLSVIYASIYYTR---GFL---LYLSMGFLMSLSAVAAVGYG 549
            .:.:|.:|..|.|:|.......:|.:.:|..:...|   |||   |.:.:..|||.|.||.    
plant   423 RVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVAC---- 483

  Fly   550 VFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVP----GLKYLSLFFYSNEALM 603
              .|:|..:..|.:...:.....|.:|.|.::..|.:|    .:.|||||.|..|.||
plant   484 --FSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIPVYWEFMHYLSLFKYPFECLM 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 78/293 (27%)
3a01204 40..673 CDD:273361 153/612 (25%)
ABC2_membrane 404..604 CDD:279410 57/215 (27%)
ABCG10NP_175734.1 3a01204 27..589 CDD:273361 155/627 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

Return to query results.
Submit another query.