DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG12

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_175561.1 Gene:ABCG12 / 841575 AraportID:AT1G51500 Length:687 Species:Arabidopsis thaliana


Alignment Length:715 Identity:173/715 - (24%)
Similarity:299/715 - (41%) Gaps:172/715 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GPSLCLEWKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLL 76
            |....|.|:.|...:|     |:| ....|     |:|...:||.:.|.::||:|.||:||:|||
plant    19 GRGAYLAWEDLTVVIP-----NFS-GGPTR-----RLLDGLNGHAEPGRIMAIMGPSGSGKSTLL 72

  Fly    77 AAISQRLRGN--LTGDVVLNGMAMERHQMTRIS----SFLPQFEINVKTFTAYEHLYFMSHFKMH 135
            .:::.||..|  :||:::|||      :..|:.    :::.|.:|.:.|.|..|.:.:.:|.::.
plant    73 DSLAGRLARNVIMTGNLLLNG------KKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLS 131

  Fly   136 RRTTKAEKRQRVADLLLAVGLRDAA-------HTRIQQLSGGERKRLSLAEELITDPIFLFCDEP 193
            ...||.|....|...::.:||:|.|       |:|  .:|||||||:|:|.|::|.|..||.|||
plant   132 SDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSR--GVSGGERKRVSVALEILTRPQILFLDEP 194

  Fly   194 TTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESH 258
            |:||||.||:.||:.||::                             :..|.:::         
plant   195 TSGLDSASAFFVIQALRNI-----------------------------ARDGGRTV--------- 221

  Fly   259 ESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAK 323
                                        :.|||||:|::|.||..:.|:..|..||.|.::.|.:
plant   222 ----------------------------VSSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVE 258

  Fly   324 FFTDLGYELPLNCNPADFYLKTL--------ADKEGKEN--------------AGAVLRAK-YEH 365
            ||.:.|:..|...||:|.:|:.:        |..:|.:.              |.:.::|: .|:
plant   259 FFAEAGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEIKARLVEN 323

  Fly   366 ETDGLYSGSWLLAR-------SYSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAF 423
            ....:|:.|   |:       |..|.:...|:...:..|..|:..|..|......|:|.......
plant   324 YRRSVYAKS---AKSRIRELASIEGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCRDIGYYWSRI 385

  Fly   424 GFFMITAVTLSLMYSGIGGLTQRTVQDV--GGSI--FMLSNEMIFTF-SYGVTYIFPAALPIIRR 483
            ..:::.:..:..::..:|......:..|  ||.|  ||       || |.|....|...:.:..:
plant   386 VIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFM-------TFMSIGGFPSFIEEMKVFYK 443

  Fly   484 EVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYASIYYTRGFLLYLSMGFLMSLSAVAAVGY 548
            |...|.|.:|.|.::..:|..|        ||    .:|....|.:.|..:.|...:|..|....
plant   444 ERLSGYYGVSVYIISNYVSSFP--------FL----VAIALITGSITYNMVKFRPGVSHWAFFCL 496

  Fly   549 GVFLS-SLFESDKMASECAAPFDLIFLIFG-----------GTYMNVDTVPGL--KY-LSLFFYS 598
            .:|.| |:.||..|......|..|:.||.|           |.:..:..:|.:  :| :|...|.
plant   497 NIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYG 561

  Fly   599 NEALMYKFWIDIDNIDC-PVNEDHPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSF 662
            :.|:...:..|...::. |:....|.: ||.:|:.:.......::.|.|..::|::.|.:.|:.|
plant   562 SWAIQGAYKNDFLGLEFDPMFAGEPKM-TGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFF 625

  Fly   663  662
            plant   626  625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 85/297 (29%)
3a01204 40..673 CDD:273361 166/687 (24%)
ABC2_membrane 404..604 CDD:279410 48/219 (22%)
ABCG12NP_175561.1 3a01204 40..635 CDD:273361 166/688 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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