DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG8

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_200098.1 Gene:ABCG8 / 835363 AraportID:AT5G52860 Length:589 Species:Arabidopsis thaliana


Alignment Length:651 Identity:164/651 - (25%)
Similarity:277/651 - (42%) Gaps:166/651 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DLIAILGGSGAGKTTLLAAISQRLRGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYE 124
            :::|::|.|||||:|||..::.: ....:|.::||.:.:......:|||::||.:......|..|
plant    56 EILAVVGPSGAGKSTLLDILASK-TSPTSGSILLNSIPINPSSYRKISSYVPQHDSFFPLLTVSE 119

  Fly   125 HLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHTRIQQ-LSGGERKRLSLAEELITDPIFL 188
            ...|.:...:...:..:|   .|..||..:.|...:|||:.| ||||||:|:|:...|:.||.||
plant   120 TFSFAACLLLPNPSIVSE---TVTSLLSELNLTHLSHTRLAQGLSGGERRRVSIGLSLLHDPCFL 181

  Fly   189 FCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEV 253
            ..||||:||||.||:.||..|:.:...|                                     
plant   182 LLDEPTSGLDSKSAFDVIHILKSIAVSR------------------------------------- 209

  Fly   254 VAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRT 318
                                         ::..|.|||||:..|..:...::|:..|.:||.||.
plant   210 -----------------------------QRTVILSIHQPSFKILSIIDRLLLLSKGTVVYHGRL 245

  Fly   319 EQAAKFFTDLGYELPLNCNPADF---YLKTLADKEGKENAGAV----LRAKYEHETDGLYSGS-- 374
            :....|....|:.:|...|..::   .|:.|.:.:|..:|.|:    .|.:.|.::...|..|  
plant   246 DSLEGFLLFKGFTVPPQLNSLEYAMEILQELRESDGNTDATALPSIENRKQREKQSIVRYRKSRI 310

  Fly   375 ---WLLARSYSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLM 436
               .||||           .|.||  ||:...|:   :|..|..:..||:           |..:
plant   311 TEISLLAR-----------RFWKI--IYRTRQLL---LTNALEALVVGLV-----------LGTI 348

  Fly   437 YSGIG----GLTQRTVQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYV 497
            |..||    |:.:|.      .:|..:...:.:.:.....||....||:.||...|.|.||::.:
plant   349 YINIGIGKAGIEKRF------GMFAFTLTFLLSSTTETLPIFINERPILLRETSSGIYRLSSHIL 407

  Fly   498 ALVLSFVPVAFFKGYVF-LSVIYA-SIYYTRG----------FLLYLSMGFLMSLSAVAAVGYGV 550
            |..|.|:|      |:| :|:||: |:|:..|          |:|.:.:..||:.|.|      :
plant   408 ANTLVFLP------YLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFV------L 460

  Fly   551 FLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVPGLKY-LSLFFYSNEALMYKFWID---ID 611
            |||||..:....:.........|.:|.|.:::.:::|  || |.::|:|    |||:.:|   |:
plant   461 FLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLP--KYWLFMYFFS----MYKYALDALLIN 519

  Fly   612 NIDCPVN---------EDHPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSF-GLVR 666
            ...|..:         :...|:.||.:||::....  :...|.:.:.|:...|::.::.| .|:|
plant   520 EYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLH--EKQRWFNVYVLLGFFVLYRVLCFLALLR 582

  Fly   667 R 667
            |
plant   583 R 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 68/256 (27%)
3a01204 40..673 CDD:273361 164/651 (25%)
ABC2_membrane 404..604 CDD:279410 54/216 (25%)
ABCG8NP_200098.1 P-loop_NTPase 29..243 CDD:304359 68/256 (27%)
3a01204 44..584 CDD:273361 164/651 (25%)
ABC2_membrane 316..519 CDD:279410 66/253 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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