DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG23

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_197442.2 Gene:ABCG23 / 832061 AraportID:AT5G19410 Length:633 Species:Arabidopsis thaliana


Alignment Length:675 Identity:157/675 - (23%)
Similarity:290/675 - (42%) Gaps:168/675 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLRGNL---TGDVVLNGMAM-ERHQMTRISS 108
            ||...|...::..::|::|.||.||:|||..||.|:....   :..|::|...: :.:|:.|:..
plant    75 ILNSVSLAAESSKILAVVGPSGTGKSTLLKIISGRVNHKALDPSSAVLMNNRKITDYNQLRRLCG 139

  Fly   109 FLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGL---RDA----AHTRIQQ 166
            |:||.:..:...|..|.|.:.:.|.: |.:|..|:.:||..||..:||   :|:    .....:.
plant   140 FVPQDDDLLPLLTVKETLMYSAKFSL-RDSTAKEREERVESLLSDLGLVLVQDSFVGEGDEEDRG 203

  Fly   167 LSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDS 231
            :|||||||:|:|.|:|.||..|..||||:||||.::..|::                        
plant   204 VSGGERKRVSIAVEMIRDPPILLLDEPTSGLDSRNSLQVVE------------------------ 244

  Fly   232 FETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSD 296
                                         ||.||.:             :.::..:.|||||:..
plant   245 -----------------------------LLATMAK-------------SKQRTVLFSIHQPSYR 267

  Fly   297 IFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTLAD-KEGKENAGAVLR 360
            |.:..:..:::..|.:::.|..|........||:::|...||.:|.::.:.. :..|.|:.||:.
plant   268 ILDYISDYLILSRGSVIHLGSLEHLEDSIAKLGFQIPEQLNPIEFAMEIVESLRTFKPNSVAVVE 332

  Fly   361 AK----YEHETDGLYSG------------SWLLARSYSGDYLKHVQNFKKIRWIYQVYLLMVRFM 409
            :.    ..:|.||:.|.            |:|.:|            |.||  ||:...|   |:
plant   333 SSSMWPENNENDGIISKKEAFRVLDVTEISYLCSR------------FCKI--IYRTKQL---FL 380

  Fly   410 TEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQRTVQDVGGSIFMLSNEMIFTFSYGVTYIF 474
            ...::.:.:||                  |:|.:..|..:|..|..     |.:..|::.::::.
plant   381 ARTMQAVVAGL------------------GLGSVYTRLKRDEEGVA-----ERLGLFAFSLSFLL 422

  Fly   475 PA---ALPI-------IRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIY------ASIY 523
            .:   ||||       :.:|...|:|.:|:|.:|..::|||..|....:|...:|      .||.
plant   423 SSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSIQ 487

  Fly   524 YTRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVPG 588
            ....|:|.:.:..||:.|.|      :|||::.......:.........|.:|.|.::..:.:|.
plant   488 AFSFFVLCVWLIILMASSLV------LFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPK 546

  Fly   589 ----LKYLSLFFYSNEALMY-KFWIDIDNIDCPVNEDHPCIKTGVEVLQQGSYRNADY-TYWLDC 647
                :.|:||:.|..|:::. ::|...:  :|..:.:..|:.||.:||::   |..|. |.|::.
plant   547 PWMFMYYVSLYRYPLESMVVNEYWSMRE--ECFSSGNMGCLMTGEDVLKE---RGLDKDTRWINV 606

  Fly   648 FSLVVVAVIFHIVSFGLVRRYIHRS 672
            ..::...|.:.|:.:|::.|...:|
plant   607 GIMLAFFVFYRILCWGILLRKASKS 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 70/278 (25%)
3a01204 40..673 CDD:273361 157/675 (23%)
ABC2_membrane 404..604 CDD:279410 47/219 (21%)
ABCG23NP_197442.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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