DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG6

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_196862.1 Gene:ABCG6 / 831202 AraportID:AT5G13580 Length:727 Species:Arabidopsis thaliana


Alignment Length:696 Identity:176/696 - (25%)
Similarity:281/696 - (40%) Gaps:170/696 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRL-RGNLTGDVVLNGMAMERHQMTRISSFLP 111
            :|...:|..:.|:::|:||.||:||:||:.|::.|: :|:|.|:|.|||..:.......||:::.
plant   108 LLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLKGNVTLNGEVLNSKMQKAISAYVM 172

  Fly   112 QFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHTRI-----QQLSGGE 171
            |.::.....|..|.|.|.:.|::.|..:|::|..||..|:..:|||:||:|.|     :.:||||
plant   173 QDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGE 237

  Fly   172 RKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPS 236
            |:|:|:..::|.|||.||.||||:||||.||.||||.|      :|||:                
plant   238 RRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVL------KRIAQ---------------- 280

  Fly   237 GESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELF 301
                   |||                                      ..|.::|||:..:..|.
plant   281 -------SGS--------------------------------------MVIMTLHQPSYRLLRLL 300

  Fly   302 THIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTLADKEGKE---------NAGA 357
            ..::.:..|:.|:.|......:||.:.|:.:|.:.|..:|.|..:.:.||..         |.|.
plant   301 DRLLFLSRGQTVFSGSPAMLPRFFAEFGHPIPEHENRTEFALDLIRELEGSAGGTRSLVEFNKGF 365

  Fly   358 VLRAKYEHETDG---------------LYSGSWLLARSYSGDYLKHVQNFKKIRWIYQVYLLMVR 407
            ..|........|               |.||:.....|.....:..:..|....|: ::.:|..|
plant   366 RQRKAEPRSQTGLSLKEAISASISKGKLVSGATTTTHSSGSSPVSTIPTFANPFWV-ELAVLAKR 429

  Fly   408 FMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQRTVQDVGGSIFMLSNEMIFTFSYGVTY 472
            .||...|......|..|..::|...|:.|:..:....:...:.:|...|.:|.    ||     |
plant   430 SMTNSRRQPELFGIRLGAVLVTGFILATMFWQLDNSPKGVQERLGCFAFAMST----TF-----Y 485

  Fly   473 IFPAALP-------IIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYASIYY------ 524
            ....|||       |..||.....|..|:|.::..|..:|     ..:.||:.:|:|.:      
plant   486 TCADALPVFLQERFIFMRETAYNAYRRSSYVLSHSLVALP-----SLIILSLAFAAITFWGVGLD 545

  Fly   525 --TRGFLLYLSMGFLMSLSAV-AAVGYGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTV 586
              ..|||.|    ||:.|::. |...:..|||.:.....:...........||:|.|.::|.|.:
plant   546 GGLMGFLFY----FLVILASFWAGSSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRI 606

  Fly   587 PG----LKYLSLFFYSNEALMYKFWID-----------IDN---IDCPVN--------------- 618
            ||    ..|:||..|..||::...:.|           .||   :..|..               
plant   607 PGYWIWFHYISLVKYPYEAVLLNEFGDPTKCFVRGVQIFDNTPLVAVPQGMKVRLLATMSKSLGM 671

  Fly   619 --EDHPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSF 662
              ....|:.||.::|||...  .|.|.| :|..:.|....|..:.|
plant   672 RITSSTCLTTGYDILQQQGV--TDLTKW-NCLWVTVAWGFFFRILF 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 83/273 (30%)
3a01204 40..673 CDD:273361 176/696 (25%)
ABC2_membrane 404..604 CDD:279410 56/219 (26%)
ABCG6NP_196862.1 3a01204 105..726 CDD:273361 176/696 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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