DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG9

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_194472.3 Gene:ABCG9 / 828850 AraportID:AT4G27420 Length:638 Species:Arabidopsis thaliana


Alignment Length:698 Identity:167/698 - (23%)
Similarity:292/698 - (41%) Gaps:160/698 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEWKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQ 81
            |:::.|.|.|..::.......|:  |..|..||:..:|.:|.|:::|:||.||:|||:||.|:..
plant    37 LKFENLVYTVKLKDSQGCFGKND--KTEERTILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGG 99

  Fly    82 RL---RGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEK 143
            |:   :|.|||::..|...:.: .:.|.:.|:.|.:......|..|.|.|.:..::.....|.||
plant   100 RVGEGKGKLTGNISYNNKPLSK-AVKRTTGFVTQDDALYPNLTVTETLVFTALLRLPNSFKKQEK 163

  Fly   144 RQRVADLLLAVGLRDAAHTRI-----QQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAY 203
            .::...::..:||.....|.|     :.:|||||||:|:.:|::.:|..||.||||:||||.:|.
plant   164 IKQAKAVMTELGLDRCKDTIIGGPFLRGVSGGERKRVSIGQEILINPSLLFLDEPTSGLDSTTAQ 228

  Fly   204 SVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMREL 268
            .::..|..|                            |.|.                        
plant   229 RIVSILWEL----------------------------ARGG------------------------ 241

  Fly   269 PALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELP 333
                           :..:.:||||:|.:|.:|..::|:..|..||.|....|..:|..:||. |
plant   242 ---------------RTVVTTIHQPSSRLFYMFDKLLLLSEGNPVYFGLGSNAMDYFASVGYS-P 290

  Fly   334 L--NCNPADFYLKTLADKEGKENA------GAVLRAKYE--------HETDGL-------YSGSW 375
            |  ..||:||.| .:|:..|.:.:      .|.|.|.|:        :|..|.       ...|.
plant   291 LVERINPSDFLL-DIANGVGSDESQRPEAMKAALVAFYKTNLLDSVINEVKGQDDLCNKPRESSR 354

  Fly   376 LLARSYSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGI 440
            :...:| ||:        ...|..|..:|:.|.:.:...:..||:.....|:::.:        .
plant   355 VATNTY-GDW--------PTTWWQQFCVLLKRGLKQRRHDSFSGMKVAQIFIVSFL--------C 402

  Fly   441 GGLTQRT----VQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVL 501
            |.|..:|    :||..|.:|.:|:...|...:...:.||....::::|...|.|.||.|:::.|:
plant   403 GLLWWQTKISRLQDQIGLLFFISSFWAFFPLFQQIFTFPQERAMLQKERSSGMYRLSPYFLSRVV 467

  Fly   502 SFVPVAFFKGYVFLSVIY---------ASIYYTRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFE 557
            ..:|:.......||.:.|         |:.:.|   ||.|.:..|:|      .|.|:.|.:|..
plant   468 GDLPMELILPTCFLVITYWMAGLNHNLANFFVT---LLVLLVHVLVS------GGLGLALGALVM 523

  Fly   558 SDKMASECAAPFDLIFLIFGGTYMNVDTVP----GLKYLSLFFYSNEALMYKFWIDIDNIDCPVN 618
            ..|.|:...:...|.||:.||.|  |..||    .:||:|:.:|:.:.|:...:        ..|
plant   524 DQKSATTLGSVIMLTFLLAGGYY--VQHVPVFISWIKYVSIGYYTYKLLILGQY--------TAN 578

  Fly   619 EDHPCIKTGVEVLQQGSYRNADYTYW----LDCFSLVVVAVIFHIVSF 662
            |.:||...|......|.:....:..:    :...:|..:.|::.::::
plant   579 ELYPCGDNGKLRCHVGDFEGIKHIGFNSGLVSALALTAMLVVYRVIAY 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 75/292 (26%)
3a01204 40..673 CDD:273361 162/675 (24%)
ABC2_membrane 404..604 CDD:279410 54/216 (25%)
ABCG9NP_194472.3 PLN03211 19..632 CDD:215634 167/698 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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