DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG42

DIOPT Version :10

Sequence 1:NP_523824.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001319945.1 Gene:ABCG42 / 827188 AraportID:AT4G15233 Length:1392 Species:Arabidopsis thaliana


Alignment Length:686 Identity:160/686 - (23%)
Similarity:276/686 - (40%) Gaps:156/686 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLR-GNLTGDVVLNGMAMERHQ 102
            |..:.::|::|...:|..|.|.|.|::|.|||||||||..:|.|.. |::.|.:.:.|....:..
plant   810 ETPQGKKLQLLSGVTGAFKPGVLTALMGVSGAGKTTLLDVLSGRKTFGDIKGQIEVGGYVKVQDT 874

  Fly   103 MTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHT----- 162
            .:|:|.:..||:|:....|..|.|.:.:..::....:...|...|.::|..:.|.:...:     
plant   875 FSRVSGYCEQFDIHSPNLTVQESLKYSAWLRLTSNISSETKCAIVNEVLETIELEEIKDSIVGIP 939

  Fly   163 RIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVY 227
            .|..|:..:||||::|.||:::|..:|.||||||||:.:|..|::.:::                
plant   940 GISGLTTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKN---------------- 988

  Fly   228 GEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQ 292
                                      :||:                         .:..:|:|||
plant   989 --------------------------IAET-------------------------GRTVVCTIHQ 1002

  Fly   293 PTSDIFELFTHIILM-DGGRIVYQG----RTEQAAKFFTDL-GY-ELPLNCNPADFYLKTLADKE 350
            |:.||||.|..:||| :||:|:|.|    .:.:..::|..: |. :|..|.|||.:.| .:..|.
plant  1003 PSIDIFEAFDELILMKNGGKIIYYGPLGQHSSKVIEYFMRIHGVPKLKENSNPATWIL-DITSKS 1066

  Fly   351 GKENAGAVLRAKYEHET--------------DGLYSGSWLLARSYSGDYLKHVQNFKKIRWIYQV 401
            .::..|..|...||..|              ..|.|...:|:..|:   ....:.||...|...:
plant  1067 SEDKLGVDLAQMYEESTLFKENKMVIEQTRCTSLGSERLILSSRYA---QTSWEQFKACLWKQHL 1128

  Fly   402 YLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMY----SGIGGLTQRTVQDVGGSIFMLSNEM 462
                     ...||....|....|...|.:...:::    ..|.  .|:.:.:|.||:|     .
plant  1129 ---------SYWRNPSYNLTRIIFMSFTCMLCGILFWQKAKEIN--NQQDLFNVFGSMF-----T 1177

  Fly   463 IFTFSYGV----TYIFPAALP--IIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYAS 521
            :..|| |:    |.:|..|..  :..||.....|:..||.:|.||..:|.:.|:..|::.::|..
plant  1178 VVLFS-GINNCSTVLFSVATERNVFYRERFSRMYNSWAYSLAQVLVEIPYSLFQSIVYVIIVYPM 1241

  Fly   522 I-YYTRGFLLYLSMGFLMSLSAVAAVGY-GVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVD 584
            : |:...|.::.|  |......:....| |:.|..:..:..:|....:.|..|..:|.|..|...
plant  1242 VGYHWSVFKVFWS--FYSIFCTLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKP 1304

  Fly   585 TVP----GLKYLSLFFYSNEALMYKFWIDIDNIDCPVNEDHPCIKTGVEVLQQGSYRNA-----D 640
            .:|    .:.|||...:....|:...:.|::.                |:|..|..:..     |
plant  1305 NIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEK----------------EILAFGEKKKVSDFLED 1353

  Fly   641 Y-TYWLDCFSLV-VVAVIFHIVSFGLVRRYIHRSGY 674
            | .|..|..:|| ||.:.|.|:...|...:|.:..:
plant  1354 YFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNF 1389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_523824.1 3a01204 40..673 CDD:273361 159/682 (23%)
ABCG42NP_001319945.1 PLN03140 13..1392 CDD:215599 160/686 (23%)

Return to query results.
Submit another query.