DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG41

DIOPT Version :10

Sequence 1:NP_523824.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001329357.1 Gene:ABCG41 / 827186 AraportID:AT4G15215 Length:1397 Species:Arabidopsis thaliana


Alignment Length:689 Identity:158/689 - (22%)
Similarity:284/689 - (41%) Gaps:149/689 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LCLEWKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAI 79
            |.:.::.:.||:            |..:.:..::|.|.:|.:|.|.|.:::|.|||||||||..:
plant   803 LTVTFQNVQYYI------------ETPQGKTRQLLFDITGALKPGVLTSLMGVSGAGKTTLLDVL 855

  Fly    80 S-QRLRGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEK 143
            | ::.||.:.|::.:.|....:....|:|.:..||:|:....|..|.|.:.:..::........|
plant   856 SGRKTRGIIKGEIRVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDAKTK 920

  Fly   144 RQRVADLLLAVGLRDAAHTR-----IQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAY 203
            .:.|.::|..|.|.|...:.     |..||..:||||::|.||:::|..:|.||||||||:.:|.
plant   921 NELVKEVLETVELEDIKDSMVGLPGISGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAA 985

  Fly   204 SVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMREL 268
            .|::.:::                                          |||:           
plant   986 IVMRAVKN------------------------------------------VAET----------- 997

  Fly   269 PALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILM-DGGRIVYQG----RTEQAAKFFTDL 328
                          .:..:|:||||:.||||.|..:||| |||::||.|    .:.:..|:|..:
plant   998 --------------GRTVVCTIHQPSIDIFETFDELILMKDGGQLVYYGPLGKHSSKVIKYFESI 1048

  Fly   329 -GY-ELPLNCNPADFYLKTLADKEGKENAGAVLRAKYEHETDGLYSGS-----WLLARSYSGDYL 386
             |. ::..|||||.:.| .:..|..:...|......|:..|  ||..:     .|.:.|...:.|
plant  1049 PGVPKVQKNCNPATWML-DITCKSAEHRLGMDFAQAYKDST--LYKENKMVVEQLSSASLGSEAL 1110

  Fly   387 KHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMY----SGIGGLTQRT 447
            .....:.:..| .|:...:.:......||....|....|.::.::..||::    ..|.  .|:.
plant  1111 SFPSRYSQTGW-GQLKACLWKQHCSYWRNPSHNLTRIVFILLNSLLCSLLFWQKAKDIN--NQQD 1172

  Fly   448 VQDVGGSIFMLSNEMIFTFSYG------VTYIFPAALPIIRREVGEGTYSLSAYYVALVLSFVPV 506
            :..:.||::.:   :||:   |      |.........:..||.....||..||..:.||..||.
plant  1173 LFSIFGSMYTI---VIFS---GINNCATVMNFIATERNVFYRERFARMYSSWAYSFSQVLVEVPY 1231

  Fly   507 AFFKGYVFLSVIYASI-YYTRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFD 570
            :..:..:...::|..| |:...:.::.|: :.:..|.:.....|:.:.:|..:..||....:.|.
plant  1232 SLLQSLLCTIIVYPMIGYHMSVYKMFWSL-YSIFCSLLIFNYCGMLMVALTPNIHMALTLRSTFF 1295

  Fly   571 LIFLIFGGTYMNVDTVP----GLKYLSLFFYSNEALMYKFWIDIDNIDCPVNEDHPCIKTGVEVL 631
            .:..:|.|..|....:|    .:.|||...:..|.|:...:.|::.                |:.
plant  1296 SMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEK----------------EIT 1344

  Fly   632 QQGSYRNADYTYWLDCF-----SLVVVAVIFHIVSFGLV 665
            ..|..::.. .:..|.|     ||.|||  |.:::|.::
plant  1345 VFGEKKSVS-AFLEDYFGYKHDSLAVVA--FVLIAFPII 1380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_523824.1 3a01204 40..673 CDD:273361 154/664 (23%)
ABCG41NP_001329357.1 PLN03140 25..1397 CDD:215599 158/689 (23%)

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