DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and ABCG20

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_190919.1 Gene:ABCG20 / 824519 AraportID:AT3G53510 Length:739 Species:Arabidopsis thaliana


Alignment Length:738 Identity:180/738 - (24%)
Similarity:290/738 - (39%) Gaps:191/738 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEWKQLNYYVPDQEQ-------SNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTT 74
            |.:|.|.|.|..:::       .|..|.....:.....:|...||..:.|:::|:||.||:||:|
plant    88 LSFKDLTYSVKIKKKFKPFPCCGNSPFDGNDMEMNTKVLLNGISGEAREGEMMAVLGASGSGKST 152

  Fly    75 LLAAISQRL-RGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRT 138
            |:.|::.|: :.:|.||:.|||..:|......||:::.|.::.....|..|.|.|.:.|::....
plant   153 LIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSL 217

  Fly   139 TKAEKRQRVADLLLAVGLRDAAHTRI-----QQLSGGERKRLSLAEELITDPIFLFCDEPTTGLD 198
            :|.:|:.||..|:..:|||:||.|.|     :.:|||||:|:|:..::|.|||.||.||||:|||
plant   218 SKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLD 282

  Fly   199 SFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQ 263
            |.|||.|:|.|      :|||:                       |||                 
plant   283 STSAYMVVKVL------QRIAQ-----------------------SGS----------------- 301

  Fly   264 TMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDL 328
                                 ..|.|||||:..|..|...:|.:..|..||.|......:||::.
plant   302 ---------------------IVIMSIHQPSYRILGLLDKLIFLSRGNTVYSGSPTHLPQFFSEF 345

  Fly   329 GYELPLNCNPADFYLKTLADKEGKENAGAVL-------RAKYEHETDG----------------- 369
            |:.:|.|.|..:|.|..:.:.|........|       |||   :|..                 
plant   346 GHPIPENENKPEFALDLIRELEDSPEGTKSLVEFHKQWRAK---QTSSQSRRNTNVSLKDAISAS 407

  Fly   370 -----LYSGSWLLARSYSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMIT 429
                 |.||:..|..|:        |.|....|. ::.::..|.:....|......|..|..::|
plant   408 ISRGKLVSGATNLRSSF--------QTFANPFWT-EMLVIGKRSILNSRRQPELFGIRLGAVLVT 463

  Fly   430 AVTLSLMYSGIGGLTQRTVQDVGGSIFMLSNEMIFTFSYGVT-YIFPAALP-------IIRREVG 486
            .:.|:.::..:.. :.|.:|:..|         .|.|:...| |....|:|       |..||..
plant   464 GMILATIFWKLDN-SPRGIQERLG---------FFAFAMSTTFYTCAEAIPVFLQERYIFMRETA 518

  Fly   487 EGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYASIYY---TRGFLLYLSMGFLMSLSAV-AAVG 547
            ...|..|:|.:|..:..:|........|.:..::::..   :.|||.:    |...|:|. |...
plant   519 YNAYRRSSYVLAHTIISIPALIILSAAFAASTFSAVGLAGGSEGFLFF----FFTILTAFWAGSS 579

  Fly   548 YGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVP----GLKYLSLFFYSNEALMYKFWI 608
            :..|||.:.....:...........||:|.|.:::.|.:|    ...||||..|..|.::...:.
plant   580 FVTFLSGVVSHVMIGFTVVVAILAYFLLFSGFFISRDRIPLYWIWFHYLSLVKYPYEGVLQNEFE 644

  Fly   609 D-----------IDNIDCPVNE----------------------DHPCIKTGVEVL-QQGSYRNA 639
            |           .||  .|:.:                      ...|:.||:::| |||.   .
plant   645 DPTKCFVRGIQMFDN--SPLGQVPTAVKISLLKSMSGVLGINVTAETCVTTGIDILKQQGI---T 704

  Fly   640 DYTYWLDCFSLVVVAVIFHIVSF 662
            :.:.| :|..:.|....|..|.|
plant   705 EISKW-NCLWITVAWGFFFRVLF 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 89/297 (30%)
3a01204 40..673 CDD:273361 173/708 (24%)
ABC2_membrane 404..604 CDD:279410 46/215 (21%)
ABCG20NP_190919.1 P-loop_NTPase 119..333 CDD:304359 87/280 (31%)
3a01204 120..738 CDD:273361 173/706 (25%)
ABC2_membrane 438..641 CDD:279410 46/216 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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