DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG27

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001319729.1 Gene:ABCG27 / 824396 AraportID:AT3G52310 Length:743 Species:Arabidopsis thaliana


Alignment Length:710 Identity:170/710 - (23%)
Similarity:293/710 - (41%) Gaps:152/710 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QGGPS--LCLEWKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGK 72
            |..|:  :.|::..:.|.|..:..::.|         |..||...||....|:|:|::|.||:||
plant   138 QAEPTFPIYLKFIDITYKVTTKGMTSSS---------EKSILNGISGSAYPGELLALMGPSGSGK 193

  Fly    73 TTLLAAISQRL-RGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHR 136
            ||||.|:..|. :.|:.|.|..|.....:|..||| .|:.|.::.....|..|.|.:.:..::.:
plant   194 TTLLNALGGRFNQQNIGGSVSYNDKPYSKHLKTRI-GFVTQDDVLFPHLTVKETLTYTALLRLPK 257

  Fly   137 RTTKAEKRQRVADLLLAVGLRDAAHTRI-----QQLSGGERKRLSLAEELITDPIFLFCDEPTTG 196
            ..|:.||.||.|.::..:||.....|.|     :.:|||||||:.:..|::|:|..|..||||:.
plant   258 TLTEQEKEQRAASVIQELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIMTNPSLLLLDEPTSS 322

  Fly   197 LDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESL 261
            |||.:|..:::.|.  |    |||..                                       
plant   323 LDSTTALKIVQMLH--C----IAKAG--------------------------------------- 342

  Fly   262 LQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFT 326
                                  |..:.:||||:|.:|..|..::::..|.::|.|:..:|..:|:
plant   343 ----------------------KTIVTTIHQPSSRLFHRFDKLVVLSRGSLLYFGKASEAMSYFS 385

  Fly   327 DLGYELPLNCNPADFYLKTLADKEGKENAGAVLRAKYEHETDGLYSGSWLLARSYSGDYLK---- 387
            .:|....|..|||:|.|..:.......:..:.|:.|.:........||...|.:...:||:    
plant   386 SIGCSPLLAMNPAEFLLDLVNGNMNDISVPSALKEKMKMXNSCSEIGSSKPAPTVVYEYLEEAYK 450

  Fly   388 -HVQNFKKIR-------------------------WIYQVYLLMVRFMTEDLRNIRSGLIAFGFF 426
             .:...:|::                         |..|..||.:|.:.|...:..|.| .....
plant   451 TQIAVMEKMKLMAPVPLDEEVKLMITCPKREWGLSWWEQYCLLSLRGIKERRHDYFSWL-RVTQV 514

  Fly   427 MITAVTLSLMYSGIGGLTQRTVQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYS 491
            :.||:.|.|::......:.:.:||..|.:|.::....|...:...:.||....::.:|.....|.
plant   515 LSTAIILGLLWWQSDITSXKGLQDQVGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERESNMYR 579

  Fly   492 LSAYYVALVLSFVPVAFFKGYVFLSVIYASIYYTRGFLLYLSMGFLMSLSA----VAAVGYGVFL 552
            ||||:||...|.:|:......:||.|    :|:..|..|.....||..|:.    |||.|.|:.:
plant   580 LSAYFVARTTSDLPLDLILPVLFLVV----VYFMAGLRLRAESFFLSVLTVFLCIVAAQGLGLAI 640

  Fly   553 SSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVP----GLKYLSLFFYSNEALMYKFWIDIDNI 613
            .:.....|.|:..|:...:.|::.||.:  |..||    .::::| |.|....|:.|  :..:.|
plant   641 GASLMDLKKATTLASVTVMTFMLAGGYF--VKKVPFFIAWIRFMS-FNYHTYKLLVK--VQYEEI 700

  Fly   614 DCPVNEDHPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVS-FGLVRRYIHRS 672
            ...||.:.  |::|::                :..:||.:.:.:.:|: |.|.|..:|.|
plant   701 MESVNGEE--IESGLK----------------EVSALVAMIIGYRLVAYFSLRRMKLHSS 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 77/290 (27%)
3a01204 40..673 CDD:273361 164/678 (24%)
ABC2_membrane 404..604 CDD:279410 53/207 (26%)
ABCG27NP_001319729.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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